Optogenetic control of cAMP oscillations reveals frequency-selective transcription factor dynamics in <i>Dictyostelium</i>

Oscillatory dynamics and their modulation are crucial for cellular decision-making; however, analysing these dynamics remains challenging. Here, we present a tool that combines the light-activated adenylate cyclase mPAC with the cAMP biosensor Pink Flamindo, enabling precise manipulation and real-time monitoring of cAMP oscillation frequencies in Dictyostelium. High-frequency modulation of cAMP oscillations induced cell aggregation and multicellular formation, even at low cell densities, such as a few dozen cells. At the population level, chemotactic aggregation is driven by modulated frequency signals. Additionally, modulation of cAMP frequency significantly reduced the amplitude of the shuttling behaviour of the transcription factor GtaC, demonstrating low-pass filter characteristics capable of converting subtle oscillation changes, such as from 6 min to 4 min, into gene expression. These findings enhance our understanding of frequency-selective cellular decoding and its role in cellular signalling and development.

Authors

Institutions

Publication Details

Journal
Development
Published
2025-01-01
DOI
https://doi.org/10.1242/dev.204403
Citations
4
Primary Topic
Cellular Mechanics and Interactions
Type
article
Field-Weighted Citation Impact
4.61

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Optogenetic control of cAMP oscillations reveals frequency-selective transcription factor dynamics in Dictyostelium

Kenichi Shimane, Tetsuya Muramoto, Kensuke Yamashita
4 citations
Development
Cellular Mechanics and Interactions
4.61
article

Optogenetic control of cAMP oscillations reveals frequency-selective transcription factor dynamics in Dictyostelium

Kenichi Shimane, Tetsuya Muramoto, Kensuke Yamashita
article en
4 citations

Abstract

Oscillatory dynamics and their modulation are crucial for cellular decision-making; however, analysing these dynamics remains challenging. Here, we present a tool that combines the light-activated adenylate cyclase mPAC with the cAMP biosensor Pink Flamindo, enabling precise manipulation and real-time monitoring of cAMP oscillation frequencies in Dictyostelium. High-frequency modulation of cAMP oscillations induced cell aggregation and multicellular formation, even at low cell densities, such as a few dozen cells. At the population level, chemotactic aggregation is driven by modulated frequency signals. Additionally, modulation of cAMP frequency significantly reduced the amplitude of the shuttling behaviour of the transcription factor GtaC, demonstrating low-pass filter characteristics capable of converting subtle oscillation changes, such as from 6 min to 4 min, into gene expression. These findings enhance our understanding of frequency-selective cellular decoding and its role in cellular signalling and development.

DevelopmentVol. 152(1)
Toho University (JP)
University of Dundee, Toho University, Japan Society for the Promotion of Science
Peace, Justice and strong institutions
Openalex Percentile: Top 7%
Cellular Mechanics and Interactions
4.61
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Optogenetic control of cAMP oscillations reveals frequency-selective transcription factor dynamics in <i>Dictyostelium</i> — Kenichi Shimane, Tetsuya Muramoto, et al. · Development (2025) | TGRS Research Map | TGRS