The Alzheimer’s Disease Sequencing Project – Discovery, Discovery Extension and Follow Up Study (ADSP‐FUS): <i>APOE</i> genotype status and demographic characteristics across datasets

The ADSP currently consists of 40 cohorts comprised of ∼36,300 individuals, with plans to sequence >110,000 individuals from diverse race/ethnicity. Genotyping, sequencing, and clinical adjudication has been performed on 36,361 participants (cases N = 12,133, median age = 72; cognitively-unimpaired(CU) individuals N = 17,116, median age = 74; ADRD N = 7,112, median age = 71). Mean ages for cases and controls vary across cohorts, 57.0+5.6 to 86.5+4.2 cases and 63.3+7.8 to 90.0+0 controls. 61% participants female, distributed as follows: cases(60.3%), CU(63.7%), and ADRD(55.8%). APOE genotype proportions differ considerably across reported race/ethnicity, for example highest for APOE ε4/ε4 carriers observed in Non-Hispanic whites participants (7.4%) and the lowest in Asians (1.7%) CONCLUSION: The results provide an overview of clinical features in ADSP cohorts. The growth of the ADSP-FUS 2.0 is central to the ADSP and expanding the size and diversity of this genomic resource available via NIAGADS. WGS data will be integrated with ADSP programs focused on phenotype harmonization, association analyses, functional genomics, and machine learning. In concert with these programs, the ADSP-FUS 2.0 will accelerate the identification and understanding of potential genetic risk and protective variants for AD across all populations with the target of developing new treatments that are globally effective.

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Publication Details

Journal
Alzheimer s & Dementia
Published
2024-12-01
DOI
https://doi.org/10.1002/alz.092629
Primary Topic
Genomics and Rare Diseases
Type
article
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article

The Alzheimer’s Disease Sequencing Project – Discovery, Discovery Extension and Follow Up Study (ADSP‐FUS): APOE genotype status and demographic characteristics across datasets

Andrew Zaman, Clifton L. Dalgard, Weixin Wang, Jovita D. Inciute et al.
Alzheimer s & Dementia
Genomics and Rare Diseases
article

The Alzheimer’s Disease Sequencing Project – Discovery, Discovery Extension and Follow Up Study (ADSP‐FUS): APOE genotype status and demographic characteristics across datasets

Andrew Zaman, Clifton L. Dalgard, Weixin Wang, Jovita D. Inciute, Patrice L. Whitehead, Michael L. Cuccaro, Amanda B Kuzma, Jeffery M. Vance, Tatiana Foroud, Adam C. Naj, Pedro Mena, Richard P Mayeux, Eden R. Martin, Brian W. Kunkle, Badri Narayan Vardarajan, Dolly Reyes‐Dumeyer, Gerard D. Schellenberg, Heather Nicaretta, Kelley Faber, Larry D. Adams, Margaret A Pericak‐Vance
article en

Abstract

The ADSP currently consists of 40 cohorts comprised of ∼36,300 individuals, with plans to sequence >110,000 individuals from diverse race/ethnicity. Genotyping, sequencing, and clinical adjudication has been performed on 36,361 participants (cases N = 12,133, median age = 72; cognitively-unimpaired(CU) individuals N = 17,116, median age = 74; ADRD N = 7,112, median age = 71). Mean ages for cases and controls vary across cohorts, 57.0+5.6 to 86.5+4.2 cases and 63.3+7.8 to 90.0+0 controls. 61% participants female, distributed as follows: cases(60.3%), CU(63.7%), and ADRD(55.8%). APOE genotype proportions differ considerably across reported race/ethnicity, for example highest for APOE ε4/ε4 carriers observed in Non-Hispanic whites participants (7.4%) and the lowest in Asians (1.7%) CONCLUSION: The results provide an overview of clinical features in ADSP cohorts. The growth of the ADSP-FUS 2.0 is central to the ADSP and expanding the size and diversity of this genomic resource available via NIAGADS. WGS data will be integrated with ADSP programs focused on phenotype harmonization, association analyses, functional genomics, and machine learning. In concert with these programs, the ADSP-FUS 2.0 will accelerate the identification and understanding of potential genetic risk and protective variants for AD across all populations with the target of developing new treatments that are globally effective.

Alzheimer s & DementiaVol. 20(S1)
NewYork–Presbyterian Hospital (US), University of Miami (US), Uniformed Services University of the Health Sciences (US), Columbia University Irving Medical Center (US), New York Hospital Queens (US), Dr. John T. Macdonald Foundation (US), Columbia University (US), University of Pennsylvania (US)
Openalex Percentile: Top 73%
Genomics and Rare Diseases
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