You Win Some, You Lose Some: Modifying the Molecular Periphery of Nitrofuran-Tagged Diazaspirooctane Reshapes Its Antibacterial Activity Profile
The use of the concept of privileged structures significantly accelerates the search for new leads and their optimization. 6-(methylsulfonyl)-8-(4-methyl-4<i>H</i>-1,2,4-triazol-3-yl)-2-(5-nitro-2-furoyl)-2,6-diazaspiro[3.4]octane <b>1</b> has been identified as a lead, with MICs of 0.0124-0.0441 μg/mL against <i>MTb</i> multiresistant strains. Several series of structural analogues have been synthesized, including variations in the periphery and simplifications of their scaffolds. All synthesized compounds were tested against the <i>MTb</i> H37Rv strain and ESKAPE panel of pathogens using serial broth dilutions. However, an attempt to optimize structure of <b>1</b> did not lead to the development of more active compounds which can work against <i>MTb</i>, but to substances with high activity against <i>S. aureus</i>. Induced-fit docking and MM-GBSA calculations determined a change in the likely biotarget from deazaflavin-dependent nitroreductase to azoreductases. The privileged nature of the scaffold was demonstrated by the detection of a different type of activity.
Authors
- Marine Dogonadze
- Alexey Lukin (ORCID: https://orcid.org/0000-0001-6162-4851)
- Л. А. Краева (ORCID: https://orcid.org/0000-0002-9115-3250)
- Viktor A. Korzhikov-Vlakh (ORCID: https://orcid.org/0000-0002-3509-3978)
- Kristina Komarova
- Elizaveta Rogacheva (ORCID: https://orcid.org/0000-0002-3843-0685)
- Yuri B. Porozov (ORCID: https://orcid.org/0000-0002-5450-3135)
- Maxim Gureev (ORCID: https://orcid.org/0000-0002-0385-922X)
- Lyubov Vinogradova
- М. В. Чудинов (ORCID: https://orcid.org/0000-0001-9735-9690)
- Maxim Zhuravlev
- Dmitry Deniskin
- Tatiana Vinogradova
- Anastasia Poliakova
Institutions
- St Petersburg University (RU)
- Saint Petersburg Pasteur Institute (RU)
- Institute of Cytology (RU)
- Ministry of Health of the Russian Federation (RU)
- Research Institute of General Pathology and Pathophysiology, the Russian Academy of Medical Sciences (RU)
- MIREA - Russian Technological University (RU)
- Saint-Petersburg Research Institute of Phthisiopulmonology (RU)
Publication Details
- Journal
- International Journal of Molecular Sciences
- Published
- 2024-12-29
- DOI
- https://doi.org/10.3390/ijms26010207
- Citations
- 1
- Primary Topic
- Click Chemistry and Applications
- Type
- article
- Field-Weighted Citation Impact
- 0.25
Funders
- Russian Science Foundation