<scp>modelRxiv</scp> : A Platform for the Dissemination and Interactive Display of Models

Modelling the dynamics of biological processes is ubiquitous across the ecological and evolutionary disciplines. However, the increasing complexity of these models poses a challenge to the dissemination of model-derived results. Often only a small subset of model results are made available to the scientific community, with further exploration of the parameter space relying on local deployment of code supplied by the authors. This can be technically challenging, owing to the diversity of frameworks and environments in which models are developed. To address this issue, we developed a platform that serves as an interactive repository of biological models, called modelRxiv. To facilitate adding models to modelRxiv, we utilise large-language models (LLMs) to make the platform language-agnostic. The platform provides a unified interface for the analysis of models that do not require any technical understanding of the model implementation, thus improving the accessibility, reproducibility and validation of ecological and evolutionary models.

Authors

Institutions

Publication Details

Journal
Ecology Letters
Published
2024-12-31
DOI
https://doi.org/10.1111/ele.70042
Primary Topic
Model-Driven Software Engineering Techniques
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

modelRxiv : A Platform for the Dissemination and Interactive Display of Models

Keith D. Harris, Gili Greenbaum, Guy Hadari
Ecology Letters
Model-Driven Software Engineering Techniques
article

modelRxiv : A Platform for the Dissemination and Interactive Display of Models

Keith D. Harris, Gili Greenbaum, Guy Hadari
article en

Abstract

Modelling the dynamics of biological processes is ubiquitous across the ecological and evolutionary disciplines. However, the increasing complexity of these models poses a challenge to the dissemination of model-derived results. Often only a small subset of model results are made available to the scientific community, with further exploration of the parameter space relying on local deployment of code supplied by the authors. This can be technically challenging, owing to the diversity of frameworks and environments in which models are developed. To address this issue, we developed a platform that serves as an interactive repository of biological models, called modelRxiv. To facilitate adding models to modelRxiv, we utilise large-language models (LLMs) to make the platform language-agnostic. The platform provides a unified interface for the analysis of models that do not require any technical understanding of the model implementation, thus improving the accessibility, reproducibility and validation of ecological and evolutionary models.

Ecology LettersVol. 28(1)
Hebrew University of Jerusalem (IL)
German-Israeli Foundation for Scientific Research and Development, Hebrew University of Jerusalem, Israel Science Foundation
Openalex Percentile: Top 75%
Model-Driven Software Engineering Techniques
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

<scp>modelRxiv</scp> : A Platform for the Dissemination and Interactive Display of Models — Keith D. Harris, Gili Greenbaum, et al. · Ecology Letters (2024) | TGRS Research Map | TGRS