Augmented prediction of vertebral collapse after osteoporotic vertebral compression fractures through parameter-efficient fine-tuning of biomedical foundation models

Vertebral collapse (VC) following osteoporotic vertebral compression fracture (OVCF) often requires aggressive treatment, necessitating an accurate prediction for early intervention. This study aimed to develop a predictive model leveraging deep neural networks to predict VC progression after OVCF using magnetic resonance imaging (MRI) and clinical data. Among 245 enrolled patients with acute OVCF, data from 200 patients were used for the development dataset, and data from 45 patients were used for the test dataset. To construct an accurate prediction model, we explored two backbone architectures: convolutional neural networks and vision transformers (ViTs), along with various pre-trained weights and fine-tuning methods. Through extensive experiments, we built our model by performing parameter-efficient fine-tuning of a ViT model pre-trained on a large-scale biomedical dataset. Attention rollouts indicated that the contours and internal features of the compressed vertebral body were critical in predicting VC with this model. To further improve the prediction performance of our model, we applied the augmented prediction strategy, which uses multiple MRI frames and achieves a significantly higher area under the curve (AUC). Our findings suggest that employing a biomedical foundation model fine-tuned using a parameter-efficient method, along with augmented prediction, can significantly enhance medical decisions.

Authors

Institutions

Publication Details

Journal
Scientific Reports
Published
2024-12-30
DOI
https://doi.org/10.1038/s41598-024-82902-w
Citations
4
Primary Topic
Medical Imaging and Analysis
Type
article
Field-Weighted Citation Impact
0.74

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Augmented prediction of vertebral collapse after osteoporotic vertebral compression fractures through parameter-efficient fine-tuning of biomedical foundation models

Seung Wook Kim, Il Kim, Sung Bae Park, Choonghyo Kim et al.
4 citations
Scientific Reports
Medical Imaging and Analysis
0.74
article

Augmented prediction of vertebral collapse after osteoporotic vertebral compression fractures through parameter-efficient fine-tuning of biomedical foundation models

Seung Wook Kim, Il Kim, Sung Bae Park, Choonghyo Kim, Woon Tak Yuh, Young San Ko, Wonwoo Cho, Soo-Chul Han
article en
4 citations

Abstract

Vertebral collapse (VC) following osteoporotic vertebral compression fracture (OVCF) often requires aggressive treatment, necessitating an accurate prediction for early intervention. This study aimed to develop a predictive model leveraging deep neural networks to predict VC progression after OVCF using magnetic resonance imaging (MRI) and clinical data. Among 245 enrolled patients with acute OVCF, data from 200 patients were used for the development dataset, and data from 45 patients were used for the test dataset. To construct an accurate prediction model, we explored two backbone architectures: convolutional neural networks and vision transformers (ViTs), along with various pre-trained weights and fine-tuning methods. Through extensive experiments, we built our model by performing parameter-efficient fine-tuning of a ViT model pre-trained on a large-scale biomedical dataset. Attention rollouts indicated that the contours and internal features of the compressed vertebral body were critical in predicting VC with this model. To further improve the prediction performance of our model, we applied the augmented prediction strategy, which uses multiple MRI frames and achieves a significantly higher area under the curve (AUC). Our findings suggest that employing a biomedical foundation model fine-tuned using a parameter-efficient method, along with augmented prediction, can significantly enhance medical decisions.

Scientific ReportsVol. 14(1)
Seoul National University (KR), Hallym University (KR), Korea Advanced Institute of Science and Technology (KR), Kangwon National University (KR), Yonsei University (KR), Korea University (KR), Kyungpook National University Hospital (KR), Kyungpook National University (KR), SNUH SMG-SNU Boramae Medical Center (KR), Kangwon National University Hospital (KR), Hallym University Dongtan Sacred Heart Hospital (KR)
Seoul National University
Openalex Percentile: Top 31%
Medical Imaging and Analysis
0.74
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.