Modeling predicts facile release of nitrite but not nitric oxide from the thionitrate CH3SNO2 with relevance to nitroglycerin bioactivation

Nitroglycerin is a potent vasodilator in clinical use since the late 1800s. It functions as a prodrug that is bioactivated by formation of an enzyme-based thionitrate, E-Cys-NO<sub>2</sub>. This intermediate reportedly decomposes to release NO and NO<sub>2</sub><sup>-</sup> but their relative yields remain controversial. Hence, we determined barriers for NO and NO<sub>2</sub><sup>-</sup> production from the model thionitrate, CH<sub>3</sub>SNO<sub>2</sub>, using comprehensive high-level quantum chemistry calculations [CCSD(T)//MP2/aug-cc-pVTZ]. We find that the sulfenyl nitrite, CH<sub>3</sub>SONO, readily releases NO on (S)O-N bond homolysis but CH<sub>3</sub>SONO formation from CH<sub>3</sub>SNO<sub>2</sub> either by S-NO<sub>2</sub> bond homolysis or concerted rearrangement faces prohibitively high barriers (ΔH<sub>calc</sub>/ΔH<sup>‡</sup><sub>calc</sub> > 42 kcal/mol). Dramatically lower barriers (ΔH<sup>‡</sup><sub>calc</sub> ~ 17-21 kcal/mol) control NO<sub>2</sub><sup>-</sup> release from CH<sub>3</sub>SNO<sub>2</sub> by gas-phase hydrolysis or nucleophilic attack by OH<sup>-</sup> or CH<sub>3</sub>S<sup>-</sup> on the sulfur atom within the C-S-NO<sub>2</sub> molecular plane. Moreover, attack by either anion along the S-NO<sub>2</sub> bond results in barrierless NO<sub>2</sub><sup>-</sup> release (ΔH<sup>‡</sup><sub>calc</sub> ~ 0 kcal/mol) since a σ-hole (i.e., area of positive electrostatic potential) extends from this bond. Consistent with our high-level calculations, ALDH2 and GAPDH, enzymes implicated in nitroglycerin bioactivation via an E-Cys-NO<sub>2</sub> intermediate, catalyze mainly or exclusively NO<sub>2</sub><sup>-</sup> release from the prodrug.

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Publication Details

Journal
Scientific Reports
Published
2024-12-30
DOI
https://doi.org/10.1038/s41598-024-80230-7
Citations
1
Primary Topic
Nitric Oxide and Endothelin Effects
Type
article
Field-Weighted Citation Impact
0.33

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article

Modeling predicts facile release of nitrite but not nitric oxide from the thionitrate CH3SNO2 with relevance to nitroglycerin bioactivation

Esam A. Orabi, Esam A. Orabi, Gilles H. Peslherbe, Vinod Parmar
1 citations
Scientific Reports
Nitric Oxide and Endothelin Effects
0.33
article

Modeling predicts facile release of nitrite but not nitric oxide from the thionitrate CH3SNO2 with relevance to nitroglycerin bioactivation

Esam A. Orabi, Esam A. Orabi, Gilles H. Peslherbe, Vinod Parmar
article en
1 citations

Abstract

Nitroglycerin is a potent vasodilator in clinical use since the late 1800s. It functions as a prodrug that is bioactivated by formation of an enzyme-based thionitrate, E-Cys-NO<sub>2</sub>. This intermediate reportedly decomposes to release NO and NO<sub>2</sub><sup>-</sup> but their relative yields remain controversial. Hence, we determined barriers for NO and NO<sub>2</sub><sup>-</sup> production from the model thionitrate, CH<sub>3</sub>SNO<sub>2</sub>, using comprehensive high-level quantum chemistry calculations [CCSD(T)//MP2/aug-cc-pVTZ]. We find that the sulfenyl nitrite, CH<sub>3</sub>SONO, readily releases NO on (S)O-N bond homolysis but CH<sub>3</sub>SONO formation from CH<sub>3</sub>SNO<sub>2</sub> either by S-NO<sub>2</sub> bond homolysis or concerted rearrangement faces prohibitively high barriers (ΔH<sub>calc</sub>/ΔH<sup>‡</sup><sub>calc</sub> > 42 kcal/mol). Dramatically lower barriers (ΔH<sup>‡</sup><sub>calc</sub> ~ 17-21 kcal/mol) control NO<sub>2</sub><sup>-</sup> release from CH<sub>3</sub>SNO<sub>2</sub> by gas-phase hydrolysis or nucleophilic attack by OH<sup>-</sup> or CH<sub>3</sub>S<sup>-</sup> on the sulfur atom within the C-S-NO<sub>2</sub> molecular plane. Moreover, attack by either anion along the S-NO<sub>2</sub> bond results in barrierless NO<sub>2</sub><sup>-</sup> release (ΔH<sup>‡</sup><sub>calc</sub> ~ 0 kcal/mol) since a σ-hole (i.e., area of positive electrostatic potential) extends from this bond. Consistent with our high-level calculations, ALDH2 and GAPDH, enzymes implicated in nitroglycerin bioactivation via an E-Cys-NO<sub>2</sub> intermediate, catalyze mainly or exclusively NO<sub>2</sub><sup>-</sup> release from the prodrug.

Scientific ReportsVol. 14(1)
National Heart, Lung, and Blood Institute (US), PROTEO (CA), Concordia University (CA)
Concordia University, Natural Sciences and Engineering Research Council of Canada
Clean water and sanitation
Openalex Percentile: Top 34%
Nitric Oxide and Endothelin Effects
0.33
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