Cov-trans: an efficient algorithm for discontinuous transcript assembly in coronaviruses
Experimental results show that Cov-trans outperforms other assemblers in both accuracy and recall, with a notable strength in accurately identifying the boundaries of transcripts. Cov-trans is freely available at https://github.com/computer-Bioinfo/Cov-trans.git .
Authors
- Xiaoyu Guo (ORCID: https://orcid.org/0000-0002-0401-5723)
- Jin Zhao (ORCID: https://orcid.org/0000-0001-8751-428X)
- Shutao Zhang (ORCID: https://orcid.org/0000-0003-4665-5443)
- Zhenming Wu (ORCID: https://orcid.org/0009-0000-6620-0783)
Institutions
- Qingdao University (CN)
Publication Details
- Journal
- BMC Genomics
- Published
- 2024-12-30
- DOI
- https://doi.org/10.1186/s12864-024-11179-0
- Citations
- 2
- Primary Topic
- Animal Virus Infections Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.68
Funders
- National Natural Science Foundation of China
- Natural Science Foundation of Shandong Province