<i>MedShapeNet</i> – a large-scale dataset of 3D medical shapes for computer vision

MedShapeNet contains medical shapes from anatomy and surgical instruments and will continue to collect data for benchmarks and applications. The project page is: https://medshapenet.ikim.nrw/.

Authors

Institutions

Publication Details

Journal
Biomedizinische Technik/Biomedical Engineering
Published
2024-12-29
DOI
https://doi.org/10.1515/bmt-2024-0396
Citations
27
Primary Topic
Medical Imaging and Analysis
Type
article
Field-Weighted Citation Impact
4.98

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

MedShapeNet – a large-scale dataset of 3D medical shapes for computer vision

Shireen Elhabian, Emmanuel Audenaert, Bjoern Menze, Jana Fragemann et al.
27 citations
Biomedizinische Technik/Biomedical Engineering
Medical Imaging and Analysis
4.98
article

MedShapeNet – a large-scale dataset of 3D medical shapes for computer vision

Shireen Elhabian, Emmanuel Audenaert, Bjoern Menze, Jana Fragemann, Yuan Jin, Beatriz Paniagua, Costantino Grana, Fin Hendrik Bahnsen, Jan S. Kirschke, Eduardo A. Garza‐Villarreal, Florian Dubost, Carlos Ferreira, João Pedrosa, Peter F. Hoyer, S. Cornelissen, Amin Dada, Aline Van Oevelen, Jan Egger, Diego Ángeles-Valdéz, Hamza Mekhzoum, Nicholas Heller, Dženan Zukić, Amr Abourayya, Marek Wodziński, Victor Alves, Yannick Suter, Jens Kleesiek, Letícia Rittner, Fabian Hörst, Vincent Andrearczyk, Vincenzo Ferrari, Sergi Pujades, Jiancheng Yang, Matthias Gunzer, David Ellis, Konstantinos Tserpes, Vicky Vandenbossche, Viet Duc Vu, Rainer Röhrig, Ramtin Gharleghi, Thomas Maal, Frederic Jonske, Tom Vercauteren, Federico Bolelli, Lars Erik Podleska, Gregor Schiele, Seyed‐Ahmad Ahmadi, Rajni V. Patel, Yuanfeng Ji, Yannik Hanusrichter, Behrus Puladi, Christos A. Davatzikos, Thania Balducci, Kathrin Krieger, Christina Gsaxner, Afaque Rafique Memon, Pascal Fua, Thomas Küstner, Evie Vereecke, André Ferreira, Patrick Ferdinand Christ, Vahid Badeli, Aaron Kujawa, Martin Urschler, Adrien Depeursinge, Marcel Dudda, Susann Beier, Moritz Rempe, Christoph John, Claudia Krebs, Alexander Jaus, Jianxu Chen, Moon Kim, Jonathan Shapey, Oliver Speck, Arcot Sowmya, Christopher M. Schlachta, Mauricio Reyes, Reuben Dorent, Guilherme Aresta, Tiezheng Zhang, Maximilian T. Löffler, Gian Marco Melito, Daniel Haehn, Matthias Alexander Fink, Hans Liebl, Stanislav Malorodov, Luc Duong, Gijs Luijten, Oliver Basu, Enrico Nasca, Paul Friedrich, Soumick Chatterjee, Mariana Lindo, Christian Wachinger, Kate Duquesne, Luca Lumetti, Andreas Nürnberger, Sandrine de Ribaupierre, Roberto Martins de Souza, Frank Hölzle, Ezequiel de la Rosa, Hans Lamecker, Nadya Shusharina, Zdravko Marinov, Timo van Leeuwen, Sergios Gatidis, Michael Kamp, Aurélio Campilho, Jakob Wasserthal, Michele R. Aizenberg, Julius Keyl, Jef Vandemeulebroucke, Constantin Seibold, Heinrich Mächler, Richard Frayne, Alan Yuille, Hendrik Mattern, Stefanie Schreiber, Max J. H. Witjes, Rainer Stiefelhagen, Edmond Boyer, Anjany Sekuboyina, Felix Nensa, Roy Eagleson, Martin Weßling, Lukas Heine, Alexander Brehmer, Timo van Meegdenburg, Narmada Ambigapathy, Naida Solak, Hongwei Li, Xiaojun Chen, Ana Sofia Santos, Yao Zhang, José García, Jun Ma, Jianning Li, Xiaoxi Chen, Chongyu Qu, Antonio Pepe, A. Cunha, Zongwei Zhou, Ahmed Rekik, Hauke Heidemeyer, Thomas M. Deserno, Mathieu Hatt, Ping Luo, Patrick Langenhuizen, Miriam Balzer, Ti‐chiun Chang, Achraf Ben-Hamadou, Paul F. Jaeger, Alain Lalande, Hamidreza Salehi, Kangxian Xie, Wenxuan Li
article en
27 citations

Abstract

MedShapeNet contains medical shapes from anatomy and surgical instruments and will continue to collect data for benchmarks and applications. The project page is: https://medshapenet.ikim.nrw/.

Biomedizinische Technik/Biomedical EngineeringVol. 70(1)
Karlsruhe Institute of Technology (DE), University of Pisa (IT), University of Bern (CH), University of Modena and Reggio Emilia (IT), Brigham and Women's Hospital (US), Merck & Co., Inc., Rahway, NJ, USA (United States) (US), Centre National de la Recherche Scientifique (FR), University of Minnesota (US), University Health Network (CA), University Medical Center Groningen (NL), Vrije Universiteit Brussel (BE), Harvard University (US), University of British Columbia (CA), Johns Hopkins University (US), Radboud University Nijmegen (NL), Inserm (FR), University of Trás-os-Montes and Alto Douro (PT), Iran University of Medical Sciences (IR), Université de Bretagne Occidentale (FR), University of Calgary (CA), University of Groningen (NL), HES-SO University of Applied Sciences and Arts Western Switzerland (CH), Université de Bourgogne (FR), German Cancer Research Center (DE), Mehran University of Engineering and Technology (PK), Universidade Estadual de Campinas (UNICAMP) (BR), Universidade do Porto (PT), Shanghai Jiao Tong University (CN), King's College London (GB), University of Basel (CH), University of Toronto (CA), TU Dortmund University (DE), Justus-Liebig-Universität Gießen (DE), Medical University of Graz (AT), University of Zurich (CH), University of Utah (US), Heidelberg University (DE), Renji Hospital (CN), University Hospital of Bern (CH), German Center for Neurodegenerative Diseases (DE), University Hospital Heidelberg (DE), Foothills Medical Centre (CA), University Hospital of Basel (CH), TUM Klinikum (DE), Radboud University Medical Center (NL), UNSW Sydney (AU), Ghent University (BE), Harokopio University of Athens (GR), University of Massachusetts Boston (US), Medizinische Hochschule Hannover (DE), Graz University of Technology (AT), Evangelische Stiftung Volmarstein (DE), Massachusetts General Hospital (US), Computer Algorithms for Medicine (AT), Centre Inria de l'Université Grenoble Alpes (FR), Human Technopole (IT), Digital Research Centre of Sfax (TN), Essen University Hospital (DE), Leibniz Institute for Analytical Sciences - ISAS (DE), Zhejiang Lab (CN), Center for Behavioral Brain Sciences (DE), Vector Institute (CA), HES-SO Valais-Wallis (CH), University Hospital Magdeburg (DE), BG Klinikum Duisburg (DE), Maison des Sciences sociales et des Humanités de Dijon (FR), Elisabeth-TweeSteden Ziekenhuis (NL), Laboratoire de Traitement de l'Information Médicale (FR), Ferrari (Italy) (IT), Icometrix (Belgium) (BE), Stryker (Germany) (DE), INESC TEC (PT), École Polytechnique Fédérale de Lausanne (CH), Monash University (AU), University of Nebraska Medical Center (US), University of Duisburg-Essen (DE), Technical University of Munich (DE), University at Buffalo, State University of New York (US), AGH University of Krakow (PL), Kitware (United States) (US), Medical University of Vienna (AT), University of Pennsylvania (US), Eindhoven University of Technology (NL), RWTH Aachen University (DE), Universidad Nacional Autónoma de México (MX), Université Grenoble Alpes (FR), Ruhr University Bochum (DE), Technische Universität Braunschweig (DE), Otto-von-Guericke-Universität Magdeburg (DE), Stanford University (US), École de Technologie Supérieure (CA), University of Lausanne (CH), KU Leuven (BE), University of Minho (PT)
University of Pennsylvania, Nvidia, TU Graz, Internationale Beziehungen und Mobilitätsprogramme, Deutsches Krebsforschungszentrum, Stryker, University of Bern, Universitätsklinikum Essen, Rijksuniversiteit Groningen, National Natural Science Foundation of China, Radboud Universiteit, Bundesministerium für Bildung und Forschung, Austrian Science Fund, KU Leuven, Universiteit Gent, Vrije Universiteit Brussel, Université de Bourgogne, Centre National de la Recherche Scientifique, Technische Universität Braunschweig, Universitair Medisch Centrum Groningen, National and Kapodistrian University of Athens, Medizinischen Hochschule Hannover, Radboud Universitair Medisch Centrum, RWTH Aachen University, Università di Pisa, Universität Duisburg-Essen, Universidade do Minho, Harokopio University, Deutschen Konsortium für Translationale Krebsforschung, Ministerium für Kultur und Wissenschaft des Landes Nordrhein-Westfalen, Technische Universität Dortmund, Perelman School of Medicine, University of Pennsylvania, Leibniz-Gemeinschaft, European Regional Development Fund, Otto von Guericke University Magdeburg, National Cancer Institute
Reduced inequalities
Openalex Percentile: Top 4%
Medical Imaging and Analysis
4.98
DOIOpen Access PDFOpenAlex
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.