Novel anoikis-related diagnostic biomarkers for aortic dissection based on machine learning

Aortic dissection (AD) is one of the most dangerous diseases of the cardiovascular system, which is characterized by acute onset and poor prognosis, while the pathogenesis of AD is still unclear and may affect or even delay the diagnosis of AD. Anchorage-dependent cell death (Anoikis) is a special mode of cell death, which is programmed cell death caused by normal cells after detachment from extracellular matrix (ECM) and has been widely studied in the field of oncology in recent years. In this study, we applied bioinformatics analysis, according to the results of research analysis and Gene Ontology (GO), as well as Kyoto Encyclopedia of Genes and Genomes (KEGG), finally found 3 anoikis-related genes (ARGs) based on machine learning. Among these, TP53 and TUBB3 were further verified by receiver operating characteristic (ROC), gene set enrichment analysis (GSEA), gene set variation analysis (GSVA)and other methods. We hypothesize ARGs may be involved in the pathogenesis of AD through pathways such as oxidative stress, inflammatory response, and ECM. Therefore, we conclude that these ARGs can be potential factors in determining the diagnosis of AD.

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Journal
Scientific Reports
Published
2024-12-28
DOI
https://doi.org/10.1038/s41598-024-82655-6
Citations
1
Primary Topic
Aortic Disease and Treatment Approaches
Type
article
Field-Weighted Citation Impact
0.42
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article

Novel anoikis-related diagnostic biomarkers for aortic dissection based on machine learning

Tianji Zhou, Hanyi Zhang, Zhen Ouyang, Mi Wang et al.
1 citations
Scientific Reports
Aortic Disease and Treatment Approaches
0.42
article

Novel anoikis-related diagnostic biomarkers for aortic dissection based on machine learning

Tianji Zhou, Hanyi Zhang, Zhen Ouyang, Mi Wang, Feng Su
article en
1 citations

Abstract

Aortic dissection (AD) is one of the most dangerous diseases of the cardiovascular system, which is characterized by acute onset and poor prognosis, while the pathogenesis of AD is still unclear and may affect or even delay the diagnosis of AD. Anchorage-dependent cell death (Anoikis) is a special mode of cell death, which is programmed cell death caused by normal cells after detachment from extracellular matrix (ECM) and has been widely studied in the field of oncology in recent years. In this study, we applied bioinformatics analysis, according to the results of research analysis and Gene Ontology (GO), as well as Kyoto Encyclopedia of Genes and Genomes (KEGG), finally found 3 anoikis-related genes (ARGs) based on machine learning. Among these, TP53 and TUBB3 were further verified by receiver operating characteristic (ROC), gene set enrichment analysis (GSEA), gene set variation analysis (GSVA)and other methods. We hypothesize ARGs may be involved in the pathogenesis of AD through pathways such as oxidative stress, inflammatory response, and ECM. Therefore, we conclude that these ARGs can be potential factors in determining the diagnosis of AD.

Scientific ReportsVol. 14(1)
Central South University (CN), National University of Defense Technology (CN), SKiN Health (CA), Hunan Cancer Hospital (CN), Xiangya Hospital Central South University (CN)
Openalex Percentile: Top 29%
Aortic Disease and Treatment Approaches
0.42
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Novel anoikis-related diagnostic biomarkers for aortic dissection based on machine learning — Tianji Zhou, Hanyi Zhang, et al. · Scientific Reports (2024) | TGRS Research Map | TGRS