Enhancing Retinal Vessel Segmentation with a Simplified nnU-Net Model and CBAM

To better diagnose and monitor ocular diseases, segmentation of blood vessels on the retina is crucial, but manual annotation is labor-intensive and error-prone. To deal with these problems, many automatic segmentation algorithms have already been developed, with deep learning techniques, leading the advancements. This study aims to enhance retinal vessel segmentation by refining the no-new-U-Net (nnU-Net) model through two key modifications: the integration of the Convolutional Block Attention Module (CBAM) attention blocks and the replacement of the original Stage 1 nnU-Net with a simplified Residual Neural Network (ResNet)-like network. The incorporation of CBAM improves feature extraction by focusing on the most relevant features, while the ResNet-like architecture simplifies the network structure, making it more efficient. Experimental results on the Retina Blood Vessel Dataset reveal that the modified nnU-Net model significantly outperforms the original in terms of both Dice score and prediction time. Specifically, it achieves superior accuracy in identifying fine blood vessels and demonstrates reduced memory usage, showcasing its potential for delivering more precise and efficient retinal vessel segmentation.

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Publication Details

Journal
Highlights in Science Engineering and Technology
Published
2024-12-26
DOI
https://doi.org/10.54097/50tqkg08
Primary Topic
Retinal Imaging and Analysis
Type
article
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article

Enhancing Retinal Vessel Segmentation with a Simplified nnU-Net Model and CBAM

Haotian Wu
Highlights in Science Engineering and Technology
Retinal Imaging and Analysis
article

Enhancing Retinal Vessel Segmentation with a Simplified nnU-Net Model and CBAM

Haotian Wu
article en

Abstract

To better diagnose and monitor ocular diseases, segmentation of blood vessels on the retina is crucial, but manual annotation is labor-intensive and error-prone. To deal with these problems, many automatic segmentation algorithms have already been developed, with deep learning techniques, leading the advancements. This study aims to enhance retinal vessel segmentation by refining the no-new-U-Net (nnU-Net) model through two key modifications: the integration of the Convolutional Block Attention Module (CBAM) attention blocks and the replacement of the original Stage 1 nnU-Net with a simplified Residual Neural Network (ResNet)-like network. The incorporation of CBAM improves feature extraction by focusing on the most relevant features, while the ResNet-like architecture simplifies the network structure, making it more efficient. Experimental results on the Retina Blood Vessel Dataset reveal that the modified nnU-Net model significantly outperforms the original in terms of both Dice score and prediction time. Specifically, it achieves superior accuracy in identifying fine blood vessels and demonstrates reduced memory usage, showcasing its potential for delivering more precise and efficient retinal vessel segmentation.

Highlights in Science Engineering and TechnologyVol. 120
New York University (US)
Decent work and economic growth
Openalex Percentile: Top 59%
Retinal Imaging and Analysis
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Enhancing Retinal Vessel Segmentation with a Simplified nnU-Net Model and CBAM — Haotian Wu · Highlights in Science Engineering and Technology (2024) | TGRS Research Map | TGRS