A Protein with Unknown Function, Ps495620, Is Critical for the Sporulation and Oospore Production of Phytophthora sojae

While the rapid rise in bioinformatics has facilitated the identification of the domains and functions of many proteins, some still have no domain annotation or largely uncharacterized functions. However, the biological roles of unknown proteins were not clear in oomycetes. An analysis of the <i>Phytophthora sojae</i> genome database identified the protein Ps495620, which has no domain annotations and functional predictions in <i>Phytophthora</i>. This study used a CRISPR/Cas9-mediated gene replacement system to knock out <i>Ps495620</i> to elucidate its function. The <i>Ps495620</i>-knockout mutants exhibited significantly increased oospore production and decreased sporangium formation compared to the wild-type strain P6497. Transcriptomics showed that it is a key regulator of nitrogen, pyruvate, ascorbate, and adorate metabolism in <i>P. sojae</i>. Our findings indicate that Ps495620 is critical in regulating sporangium formation and oospore production in <i>P. sojae</i>.

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Journal
Journal of Fungi
Published
2024-12-27
DOI
https://doi.org/10.3390/jof11010012
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
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article

A Protein with Unknown Function, Ps495620, Is Critical for the Sporulation and Oospore Production of Phytophthora sojae

Jianqiang Miao, Xiaoran Du, Yiying Li, Yan Zeng et al.
Journal of Fungi
Genomics and Phylogenetic Studies
article

A Protein with Unknown Function, Ps495620, Is Critical for the Sporulation and Oospore Production of Phytophthora sojae

Jianqiang Miao, Xiaoran Du, Yiying Li, Yan Zeng, Peng Qin, Xili Liu
article en

Abstract

While the rapid rise in bioinformatics has facilitated the identification of the domains and functions of many proteins, some still have no domain annotation or largely uncharacterized functions. However, the biological roles of unknown proteins were not clear in oomycetes. An analysis of the <i>Phytophthora sojae</i> genome database identified the protein Ps495620, which has no domain annotations and functional predictions in <i>Phytophthora</i>. This study used a CRISPR/Cas9-mediated gene replacement system to knock out <i>Ps495620</i> to elucidate its function. The <i>Ps495620</i>-knockout mutants exhibited significantly increased oospore production and decreased sporangium formation compared to the wild-type strain P6497. Transcriptomics showed that it is a key regulator of nitrogen, pyruvate, ascorbate, and adorate metabolism in <i>P. sojae</i>. Our findings indicate that Ps495620 is critical in regulating sporangium formation and oospore production in <i>P. sojae</i>.

Journal of FungiVol. 11(1)
China Agricultural University (CN), Northwest A&F University (CN)
National Natural Science Foundation of China, National Key Research and Development Program of China
Openalex Percentile: Top 79%
Genomics and Phylogenetic Studies
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A Protein with Unknown Function, Ps495620, Is Critical for the Sporulation and Oospore Production of Phytophthora sojae — Jianqiang Miao, Xiaoran Du, et al. · Journal of Fungi (2024) | TGRS Research Map | TGRS