Computer-aided design of caffeic acid derivatives: free radical scavenging activity and reaction force
Three protocols were used: (i) CADMA-Chem (computer-assisted design of multifunctional antioxidants, based on chemical properties) to quantify ADME (absorption, distribution, metabolism, and excretion) properties, toxicity and synthetic accessibility; (ii) eH-DAMA (electron and hydrogen donating ability map) tool, to identify the derivatives expected to behave as the best antioxidants; (iii) QM-ORSA (quantum mechanics-based test for overall free radical scavenging activity), to calculate the rate constants. Electronic structure calculations were performed with Gaussian 09, at the M05-2X/6-311 + g(d,p) level of theory. Both aqueous and lipid environments were considered using the SMD continuous solvation model. Intrinsic reaction coordinate (IRC) calculations, as implemented in Gaussian 09, were used to obtain the reaction force.
Authors
- J. Raúl Alvarez‐Idaboy (ORCID: https://orcid.org/0000-0002-2901-5412)
- Adriana Pérez‐González (ORCID: https://orcid.org/0000-0002-0297-893X)
- Annia Galano (ORCID: https://orcid.org/0000-0002-1470-3060)
- B. Carolina Morales-García
Institutions
- Universidad Autónoma Metropolitana (MX)
- Universidad Nacional Autónoma de México (MX)
Publication Details
- Journal
- Journal of Molecular Modeling
- Published
- 2024-12-27
- DOI
- https://doi.org/10.1007/s00894-024-06226-2
- Citations
- 2
- Primary Topic
- Free Radicals and Antioxidants
- Type
- article
- Field-Weighted Citation Impact
- 0.50
Funders
- Universidad Autónoma Metropolitana unidad Iztapalapa