Exploring the druggability of the <scp>UEV</scp> domain of human <scp>TSG101</scp> in search for broad‐spectrum antivirals

The ubiquitin E2 variant domain of TSG101 (TSG101-UEV) plays a pivotal role in protein sorting and virus budding by recognizing PTAP motifs within ubiquitinated proteins. Disruption of TSG101-UEV/PTAP interactions has emerged as a promising strategy for the development of host-oriented broad-spectrum antivirals with low susceptibility to resistance. TSG101 is a challenging target characterized by an extended and flat binding interface, low affinity for PTAP ligands, and complex binding energetics. Here, we assess the druggability of the TSG101-UEV/PTAP binding interface by searching for drug-like inhibitors and evaluating their ability to block PTAP recognition, impair budding, and inhibit viral proliferation. A discovery workflow was established by combining in vitro miniaturized HTS assays and a set of cell-based activity assays including high-content bimolecular complementation, virus-like particle release measurement, and antiviral testing in live virus infection. This approach has allowed us to identify a set of chemically diverse molecules that block TSG101-UEV/PTAP binding with IC50s in the low μM range and are able to disrupt the interaction between full-length TSG101 and viral proteins in human cells and inhibit viral replication. State-of-the-art molecular docking studies reveal that the active compounds exploit binding hotspots at the PTAP binding site, unlocking the full binding potential of the TSG101-UEV binding pockets. These inhibitors represent promising hits for the development of novel broad-spectrum antivirals through targeted optimization and are also valuable tools for investigating the involvement of ESCRT in the proliferation of different virus families and study the secondary effects induced by the disruption of ESCRT/virus interactions.

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Journal
Protein Science
Published
2024-12-26
DOI
https://doi.org/10.1002/pro.70005
Primary Topic
interferon and immune responses
Type
article
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article

Exploring the druggability of the UEV domain of human TSG101 in search for broad‐spectrum antivirals

Marco Radi, Alejandro Rodríguez‐Martínez, Javier Murciano‐Calles, Horacio Pérez‐Sánchez et al.
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interferon and immune responses
article

Exploring the druggability of the UEV domain of human TSG101 in search for broad‐spectrum antivirals

Marco Radi, Alejandro Rodríguez‐Martínez, Javier Murciano‐Calles, Horacio Pérez‐Sánchez, Lian‐Yu Lin, Javier Ruiz‐Sanz, Irene Luque, María C. Ramos, Sandra Diederich, Francisca Vicente, Ronald N. Harty, José C. Martínez, Christiane Moog, Pedro Buzón, Francisco Castillo, Fernando Montero, Ziying Han, Marisa Parra‐López
article en

Abstract

The ubiquitin E2 variant domain of TSG101 (TSG101-UEV) plays a pivotal role in protein sorting and virus budding by recognizing PTAP motifs within ubiquitinated proteins. Disruption of TSG101-UEV/PTAP interactions has emerged as a promising strategy for the development of host-oriented broad-spectrum antivirals with low susceptibility to resistance. TSG101 is a challenging target characterized by an extended and flat binding interface, low affinity for PTAP ligands, and complex binding energetics. Here, we assess the druggability of the TSG101-UEV/PTAP binding interface by searching for drug-like inhibitors and evaluating their ability to block PTAP recognition, impair budding, and inhibit viral proliferation. A discovery workflow was established by combining in vitro miniaturized HTS assays and a set of cell-based activity assays including high-content bimolecular complementation, virus-like particle release measurement, and antiviral testing in live virus infection. This approach has allowed us to identify a set of chemically diverse molecules that block TSG101-UEV/PTAP binding with IC50s in the low μM range and are able to disrupt the interaction between full-length TSG101 and viral proteins in human cells and inhibit viral replication. State-of-the-art molecular docking studies reveal that the active compounds exploit binding hotspots at the PTAP binding site, unlocking the full binding potential of the TSG101-UEV binding pockets. These inhibitors represent promising hits for the development of novel broad-spectrum antivirals through targeted optimization and are also valuable tools for investigating the involvement of ESCRT in the proliferation of different virus families and study the secondary effects induced by the disruption of ESCRT/virus interactions.

Protein ScienceVol. 34(1)
University of Parma (IT), Friedrich-Loeffler-Institut (DE), Universidad de Granada (ES), Fundación Medina (ES), Universidad Católica de Murcia (ES), Université de Strasbourg (FR), University of Pennsylvania (US)
Openalex Percentile: Top 69%
interferon and immune responses
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