<i>pyBioPortal</i>: a Python package for simplifying cBioPortal data access in cancer research

This tool facilitates the retrieval of heterogeneous biological and clinical data in a standardized format, making it more accessible for analysis and enhancing the reproducibility of results in cancer informatics. Distributed as an open-source project, <i>pyBioPortal</i> is available to the broader bioinformatics community, promoting collaboration and advancing research in cancer genomics.

Authors

Institutions

Publication Details

Journal
JAMIA Open
Published
2024-12-26
DOI
https://doi.org/10.1093/jamiaopen/ooae146
Citations
1
Primary Topic
Cancer Genomics and Diagnostics
Type
article
Field-Weighted Citation Impact
0.29
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

pyBioPortal: a Python package for simplifying cBioPortal data access in cancer research

Matteo Valerio, Stefania Gori, Alessandro Inno
1 citations
JAMIA Open
Cancer Genomics and Diagnostics
0.29
article

pyBioPortal: a Python package for simplifying cBioPortal data access in cancer research

Matteo Valerio, Stefania Gori, Alessandro Inno
article en
1 citations

Abstract

This tool facilitates the retrieval of heterogeneous biological and clinical data in a standardized format, making it more accessible for analysis and enhancing the reproducibility of results in cancer informatics. Distributed as an open-source project, <i>pyBioPortal</i> is available to the broader bioinformatics community, promoting collaboration and advancing research in cancer genomics.

JAMIA OpenVol. 8(1)
Ospedale Sacro Cuore Don Calabria (IT)
Partnerships for the goals
Openalex Percentile: Top 36%
Cancer Genomics and Diagnostics
0.29
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.