Carbocation charge as an interpretable descriptor for the catalytic activity of hydrolytic nanozymes

A universal theory for predicting the catalytic activity of hydrolytic nanozymes has yet to be developed. Herein, by investigating the polarization and hydrolysis mechanisms of nanomaterials towards amide bonds, carbocation charge was identified as a key electronic descriptor for predicting catalytic activity in amide hydrolysis. Through machine learning correlation analysis and the Sure Independence Screening and Sparsifying Operator (SISSO) algorithm, this descriptor was interpreted to associate with the d-band center and Lewis acidity on the nanomaterial surface. On this basis, copper nanoparticles (Cu NPs) were discovered to exhibit significant hydrolytic activity. Further, peptidomic analysis and molecular dynamics simulations showed that Cu NPs demonstrated substrate selectivity. In the presence of water molecules, hydrophobic amino acid residues were driven towards the nanomaterial surface by hydrophobic groups of proteins, leading to the preferential hydrolysis of peptide bonds linked to these residues. This study provided a theoretic framework for predicting highly efficient hydrolytic nanozymes with broad potential applications.

Authors

Institutions

Publication Details

Journal
Journal of Colloid and Interface Science
Published
2024-12-26
DOI
https://doi.org/10.1016/j.jcis.2024.12.191
Citations
7
Primary Topic
Advanced Nanomaterials in Catalysis
Type
article
Field-Weighted Citation Impact
0.82

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Carbocation charge as an interpretable descriptor for the catalytic activity of hydrolytic nanozymes

Yixin Yu, Zhen Chen, Zhiling Zhu, Ziqi Zhang et al.
7 citations
Journal of Colloid and Interface Science
Advanced Nanomaterials in Catalysis
0.82
article

Carbocation charge as an interpretable descriptor for the catalytic activity of hydrolytic nanozymes

Yixin Yu, Zhen Chen, Zhiling Zhu, Ziqi Zhang, Jing Liu, Yu Guo
article en
7 citations

Abstract

A universal theory for predicting the catalytic activity of hydrolytic nanozymes has yet to be developed. Herein, by investigating the polarization and hydrolysis mechanisms of nanomaterials towards amide bonds, carbocation charge was identified as a key electronic descriptor for predicting catalytic activity in amide hydrolysis. Through machine learning correlation analysis and the Sure Independence Screening and Sparsifying Operator (SISSO) algorithm, this descriptor was interpreted to associate with the d-band center and Lewis acidity on the nanomaterial surface. On this basis, copper nanoparticles (Cu NPs) were discovered to exhibit significant hydrolytic activity. Further, peptidomic analysis and molecular dynamics simulations showed that Cu NPs demonstrated substrate selectivity. In the presence of water molecules, hydrophobic amino acid residues were driven towards the nanomaterial surface by hydrophobic groups of proteins, leading to the preferential hydrolysis of peptide bonds linked to these residues. This study provided a theoretic framework for predicting highly efficient hydrolytic nanozymes with broad potential applications.

Journal of Colloid and Interface ScienceVol. 683(Pt 2)
Qingdao University of Science and Technology (CN), Shandong University of Science and Technology (CN)
National Natural Science Foundation of China, Taishan Scholar Foundation of Shandong Province
Openalex Percentile: Top 25%
Advanced Nanomaterials in Catalysis
0.82
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Carbocation charge as an interpretable descriptor for the catalytic activity of hydrolytic nanozymes — Yixin Yu, Zhen Chen, et al. · Journal of Colloid and Interface Science (2024) | TGRS Research Map | TGRS