Decoding neuronal networks: A Reservoir Computing approach for predicting connectivity and functionality

In this study, we address the challenge of analyzing electrophysiological measurements in neuronal networks. Our computational model, based on the Reservoir Computing Network (RCN) architecture, deciphers spatio-temporal data obtained from electrophysiological measurements of neuronal cultures. By reconstructing the network structure on a macroscopic scale, we reveal the connectivity between neuronal units. Notably, our model outperforms common methods such as Cross-Correlation, Transfer-Entropy, and a recently developed related algorithm in predicting the network's connectivity map. Furthermore, we experimentally validate its ability to forecast network responses to specific inputs, including localized optogenetic stimuli.

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Publication Details

Journal
Neural Networks
Published
2024-12-26
DOI
https://doi.org/10.1016/j.neunet.2024.107058
Citations
3
Primary Topic
Neural Networks and Reservoir Computing
Type
article
Field-Weighted Citation Impact
1.04

Funders

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article

Decoding neuronal networks: A Reservoir Computing approach for predicting connectivity and functionality

Yasaman Heydari, Lorenzo Pavesi, Clara Zaccaria, Ilya Auslender et al.
3 citations
Neural Networks
Neural Networks and Reservoir Computing
1.04
article

Decoding neuronal networks: A Reservoir Computing approach for predicting connectivity and functionality

Yasaman Heydari, Lorenzo Pavesi, Clara Zaccaria, Ilya Auslender, Giorgio Letti
article en
3 citations

Abstract

In this study, we address the challenge of analyzing electrophysiological measurements in neuronal networks. Our computational model, based on the Reservoir Computing Network (RCN) architecture, deciphers spatio-temporal data obtained from electrophysiological measurements of neuronal cultures. By reconstructing the network structure on a macroscopic scale, we reveal the connectivity between neuronal units. Notably, our model outperforms common methods such as Cross-Correlation, Transfer-Entropy, and a recently developed related algorithm in predicting the network's connectivity map. Furthermore, we experimentally validate its ability to forecast network responses to specific inputs, including localized optogenetic stimuli.

Neural NetworksVol. 184
University of Trento (IT), Center for Neuroscience and Cognitive Systems (IT)
Fondazione Cassa Di Risparmio Di Trento E Rovereto, Horizon 2020 Framework Programme, European Research Council, H2020 Marie Skłodowska-Curie Actions, HORIZON EUROPE European Research Council
Affordable and clean energy
Openalex Percentile: Top 18%
Neural Networks and Reservoir Computing
1.04
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Decoding neuronal networks: A Reservoir Computing approach for predicting connectivity and functionality — Yasaman Heydari, Lorenzo Pavesi, et al. · Neural Networks (2024) | TGRS Research Map | TGRS