An Interpretable Model for Salinity Inversion Assessment of the South Bank of the Yellow River Based on Optuna Hyperparameter Optimization and XGBoost

Soil salinization is a serious land degradation phenomenon, posing a severe threat to regional agricultural resource utilization and sustainable development. It has been a mainstream trend to use machine-learning methods to achieve monitoring of large-scale salinized soil quickly. However, machine learning model training requires many samples and hyper-parameter optimization and lacks solvability. To compare the performance of different machine-learning models, this study conducted a soil sampling experiment on saline soils along the south bank of the Yellow River in Dalate Banner. The experiment lasted two years (2022 and 2023) during the spring bare soil period, collecting 304 soil samples. The soil salinity was estimated with the multi-source remote sensing satellite data by combining the extreme gradient boosting model (XGBoost), Optuna hyper-parameter optimization, and Shapley addition (SHAP) interpretable model. Correlation analysis and continuous variable projection were employed to identify key inversion factors. The regression effects of partial least squares regression (PLSR), geographically weighted regression (GWR), long short-term memory networks (LSTM), and extreme gradient boosting (XGBoost) were compared. The optimal model was selected to estimate soil salinity in the study area from 2019 to 2023. The results showed that the XGBoost model fitted optimally, the test set had high R2 (0.76) and the ratio of performance to deviation (2.05), and the estimation results were consistent with the measured salinity values. SHAP analysis revealed that the salinity index and topographic factors were the primary inversion factors. Notably, the same inversion factor influenced varying soil salinity estimates at different locations. The saline soils of the study area in 2019 and 2023 were 65% and 44%, respectively, and the overall trend of soil salinization decreased. From the viewpoint of spatial distribution, the degree of soil salinization showed a gradually increasing trend from south to north, and it was most serious on the side near the Yellow River. This study is of great significance for the quantitative estimation of salinized soil in the irrigated area on the south bank of the Yellow River, the prevention and control of soil salinization, and the sustainable development of agriculture.

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Publication Details

Journal
Agronomy
Published
2024-12-26
DOI
https://doi.org/10.3390/agronomy15010018
Citations
7
Primary Topic
Climate change and permafrost
Type
article
Field-Weighted Citation Impact
2.63

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article

An Interpretable Model for Salinity Inversion Assessment of the South Bank of the Yellow River Based on Optuna Hyperparameter Optimization and XGBoost

Youzhen Xiang, Ruiqi Du, Xiang Li, Yu Hen Hu et al.
7 citations
Agronomy
Climate change and permafrost
2.63
article

An Interpretable Model for Salinity Inversion Assessment of the South Bank of the Yellow River Based on Optuna Hyperparameter Optimization and XGBoost

Youzhen Xiang, Ruiqi Du, Xiang Li, Yu Hen Hu, Xia Liu, Fucang Zhang
article en
7 citations

Abstract

Soil salinization is a serious land degradation phenomenon, posing a severe threat to regional agricultural resource utilization and sustainable development. It has been a mainstream trend to use machine-learning methods to achieve monitoring of large-scale salinized soil quickly. However, machine learning model training requires many samples and hyper-parameter optimization and lacks solvability. To compare the performance of different machine-learning models, this study conducted a soil sampling experiment on saline soils along the south bank of the Yellow River in Dalate Banner. The experiment lasted two years (2022 and 2023) during the spring bare soil period, collecting 304 soil samples. The soil salinity was estimated with the multi-source remote sensing satellite data by combining the extreme gradient boosting model (XGBoost), Optuna hyper-parameter optimization, and Shapley addition (SHAP) interpretable model. Correlation analysis and continuous variable projection were employed to identify key inversion factors. The regression effects of partial least squares regression (PLSR), geographically weighted regression (GWR), long short-term memory networks (LSTM), and extreme gradient boosting (XGBoost) were compared. The optimal model was selected to estimate soil salinity in the study area from 2019 to 2023. The results showed that the XGBoost model fitted optimally, the test set had high R2 (0.76) and the ratio of performance to deviation (2.05), and the estimation results were consistent with the measured salinity values. SHAP analysis revealed that the salinity index and topographic factors were the primary inversion factors. Notably, the same inversion factor influenced varying soil salinity estimates at different locations. The saline soils of the study area in 2019 and 2023 were 65% and 44%, respectively, and the overall trend of soil salinization decreased. From the viewpoint of spatial distribution, the degree of soil salinization showed a gradually increasing trend from south to north, and it was most serious on the side near the Yellow River. This study is of great significance for the quantitative estimation of salinized soil in the irrigated area on the south bank of the Yellow River, the prevention and control of soil salinization, and the sustainable development of agriculture.

AgronomyVol. 15(1)
Inner Mongolia Agricultural University (CN), Northwest A&F University (CN)
National Natural Science Foundation of China, Natural Science Foundation of Inner Mongolia
Zero hunger
Openalex Percentile: Top 10%
Climate change and permafrost
2.63
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