Comparative chloroplast genome analysis of five widespread species (Zanthoxylum L.) and development of molecular markers for their discrimination

Comparative analysis revealed that <i>rps3</i>-<i>rpl22</i>-<i>rps19</i> is a highly variable divergent region in <i>Zanthoxylum</i> that could be developed as candidate markers for phylogenetic studies and species identification. This study identified a pair of molecular markers from hypervariable regions that can be used to distinguish between the five <i>Zanthoxylum</i> species and validated their utility. Overall, the results of this study provide new insights into the genetic breeding, germplasm exploration, and phylogeny of <i>Zanthoxylum</i> species.

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Publication Details

Journal
Frontiers in Genetics
Published
2024-12-24
DOI
https://doi.org/10.3389/fgene.2024.1495891
Primary Topic
Plant chemical constituents analysis
Type
article
Field-Weighted Citation Impact
0.00

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article

Comparative chloroplast genome analysis of five widespread species (Zanthoxylum L.) and development of molecular markers for their discrimination

Hua‐Min Liu, Zexiong Chen, Xueqian Fu, Ning Tang et al.
Frontiers in Genetics
Plant chemical constituents analysis
article

Comparative chloroplast genome analysis of five widespread species (Zanthoxylum L.) and development of molecular markers for their discrimination

Hua‐Min Liu, Zexiong Chen, Xueqian Fu, Ning Tang, Xinxin Zhu, Han Liu, Xia Liu, Yiqing Liu, Yuan Guo, Chong Sun
article en

Abstract

Comparative analysis revealed that <i>rps3</i>-<i>rpl22</i>-<i>rps19</i> is a highly variable divergent region in <i>Zanthoxylum</i> that could be developed as candidate markers for phylogenetic studies and species identification. This study identified a pair of molecular markers from hypervariable regions that can be used to distinguish between the five <i>Zanthoxylum</i> species and validated their utility. Overall, the results of this study provide new insights into the genetic breeding, germplasm exploration, and phylogeny of <i>Zanthoxylum</i> species.

Frontiers in GeneticsVol. 15
Xinyang Normal University (CN), Chongqing University of Arts and Sciences (CN), Chongqing Three Gorges University (CN)
Natural Science Foundation of Chongqing
Peace, Justice and strong institutions
Openalex Percentile: Top 86%
Plant chemical constituents analysis
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