Generating a Peptide Library Using the Repeats of Amino Acid Scaffolds Created by Sliding the Framework of a 7-mer Human Chemerin Segment and Discovery of Potent Antibacterial and Antimycobacterial Peptides

The quest for new approaches for generating novel bioactive designer proteins/peptides has continued with their success in various biomedical applications. Previously, we designed a 14-mer α-helical peptide with antimicrobial and antimycobacterial activities by employing a tandem repeat of the 7-mer, "KVLGRLV" human chemerin segment. Herein, we devised a new method of "sliding framework" with this segment to create amino acid scaffolds of varying sizes and sequences and explored the design of a peptide library with antibacterial and antimycobacterial activities. By utilizing 2 to 7 repeats of these 2 to 6-residue scaffolds, we designed and synthesized 30 peptides of 10-16 residue lengths. Thus, we identified novel AMPs with α-helical, β-sheet, and random coil structures, membrane-destabilizing, and intracellular modes of action, and 9 of them showed therapeutic indices between 100 and 750. Three and two of these nine peptides showed <i>in vivo</i> antibacterial and antitubercular efficacies against <i>Escherichia coli</i> ATCC 25922 and <i>Mycobacterium bovis</i> BCG infections, respectively, in a mouse model.

Authors

Institutions

Publication Details

Journal
Journal of Medicinal Chemistry
Published
2024-12-24
DOI
https://doi.org/10.1021/acs.jmedchem.4c02351
Citations
2
Primary Topic
Antimicrobial Peptides and Activities
Type
article
Field-Weighted Citation Impact
0.69

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Generating a Peptide Library Using the Repeats of Amino Acid Scaffolds Created by Sliding the Framework of a 7-mer Human Chemerin Segment and Discovery of Potent Antibacterial and Antimycobacterial Peptides

Arvind Gupta, Devesh Pratap Verma, Sariyah Akhtar, Jyotshana Saroj et al.
2 citations
Journal of Medicinal Chemistry
Antimicrobial Peptides and Activities
0.69
article

Generating a Peptide Library Using the Repeats of Amino Acid Scaffolds Created by Sliding the Framework of a 7-mer Human Chemerin Segment and Discovery of Potent Antibacterial and Antimycobacterial Peptides

Arvind Gupta, Devesh Pratap Verma, Sariyah Akhtar, Jyotshana Saroj, Mohd Mustkim Ansari, Jimut Kanti Ghosh, Bhupendra Narain Singh, Mehmood Ali, Kalyan Mitra, Neeraj Kumar Verma, Juhi Sharma, Rahul Dev Verma, Rajendra Kumar Dhuriya
article en
2 citations

Abstract

The quest for new approaches for generating novel bioactive designer proteins/peptides has continued with their success in various biomedical applications. Previously, we designed a 14-mer α-helical peptide with antimicrobial and antimycobacterial activities by employing a tandem repeat of the 7-mer, "KVLGRLV" human chemerin segment. Herein, we devised a new method of "sliding framework" with this segment to create amino acid scaffolds of varying sizes and sequences and explored the design of a peptide library with antibacterial and antimycobacterial activities. By utilizing 2 to 7 repeats of these 2 to 6-residue scaffolds, we designed and synthesized 30 peptides of 10-16 residue lengths. Thus, we identified novel AMPs with α-helical, β-sheet, and random coil structures, membrane-destabilizing, and intracellular modes of action, and 9 of them showed therapeutic indices between 100 and 750. Three and two of these nine peptides showed <i>in vivo</i> antibacterial and antitubercular efficacies against <i>Escherichia coli</i> ATCC 25922 and <i>Mycobacterium bovis</i> BCG infections, respectively, in a mouse model.

Journal of Medicinal ChemistryVol. 68(1)
Central Drug Research Institute (IN), Bastar University (IN), Academy of Scientific and Innovative Research (IN)
University Grants Commission, Central Drug Research Institute
Zero hunger
Openalex Percentile: Top 27%
Antimicrobial Peptides and Activities
0.69
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.