Generating a Peptide Library Using the Repeats of Amino Acid Scaffolds Created by Sliding the Framework of a 7-mer Human Chemerin Segment and Discovery of Potent Antibacterial and Antimycobacterial Peptides
The quest for new approaches for generating novel bioactive designer proteins/peptides has continued with their success in various biomedical applications. Previously, we designed a 14-mer α-helical peptide with antimicrobial and antimycobacterial activities by employing a tandem repeat of the 7-mer, "KVLGRLV" human chemerin segment. Herein, we devised a new method of "sliding framework" with this segment to create amino acid scaffolds of varying sizes and sequences and explored the design of a peptide library with antibacterial and antimycobacterial activities. By utilizing 2 to 7 repeats of these 2 to 6-residue scaffolds, we designed and synthesized 30 peptides of 10-16 residue lengths. Thus, we identified novel AMPs with α-helical, β-sheet, and random coil structures, membrane-destabilizing, and intracellular modes of action, and 9 of them showed therapeutic indices between 100 and 750. Three and two of these nine peptides showed <i>in vivo</i> antibacterial and antitubercular efficacies against <i>Escherichia coli</i> ATCC 25922 and <i>Mycobacterium bovis</i> BCG infections, respectively, in a mouse model.
Authors
- Arvind Gupta (ORCID: https://orcid.org/0000-0001-9828-8732)
- Devesh Pratap Verma
- Sariyah Akhtar
- Jyotshana Saroj
- Mohd Mustkim Ansari
- Jimut Kanti Ghosh (ORCID: https://orcid.org/0000-0001-7957-6296)
- Bhupendra Narain Singh (ORCID: https://orcid.org/0000-0002-8197-5381)
- Mehmood Ali
- Kalyan Mitra (ORCID: https://orcid.org/0000-0002-7252-1716)
- Neeraj Kumar Verma (ORCID: https://orcid.org/0000-0002-9688-7042)
- Juhi Sharma (ORCID: https://orcid.org/0000-0002-9820-3820)
- Rahul Dev Verma
- Rajendra Kumar Dhuriya
Institutions
- Central Drug Research Institute (IN)
- Bastar University (IN)
- Academy of Scientific and Innovative Research (IN)
Publication Details
- Journal
- Journal of Medicinal Chemistry
- Published
- 2024-12-24
- DOI
- https://doi.org/10.1021/acs.jmedchem.4c02351
- Citations
- 2
- Primary Topic
- Antimicrobial Peptides and Activities
- Type
- article
- Field-Weighted Citation Impact
- 0.69
Funders
- University Grants Commission
- Central Drug Research Institute