Crystallization and preliminary X-ray crystallographic studies of AfeH from <i>Acimetobacter</i> sp. DL-2

Fenoxaprop-P-ethyl (FE) is widely applied as a post-emergence aryloxyphenoxy propionate (AOPP) herbicide in agriculture. A novel FE hydrolase esterase from Acinetobacter sp. DL-2 (AfeH) was identified which belongs to the family IV carboxylesterases and shows less than 30% identity to other reported homologues with known structure. In order to understand the catalytic mechanism, recombinant AfeH was prepared in Escherichia coli and crystallized using the sitting-drop vapor-diffusion method. X-ray diffraction data were collected to 1.9 Å resolution. The crystal belonged to space group P12<sub>1</sub>1, with unit-cell parameters a = 84.27, b = 46.74, c = 258.68 Å. The Matthews coefficient (V<sub>M</sub>) was calculated to be 2.43 Å<sup>3</sup> Da<sup>-1</sup>, which corresponds to a solvent content of 49.4%, suggesting the presence of three monomers in the crystallographic asymmetric unit. The crystal was assessed to be suitable for further structural determination, which is currently in progress.

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Publication Details

Journal
Acta Crystallographica Section F Structural Biology Communications
Published
2024-12-24
DOI
https://doi.org/10.1107/s2053230x24012275
Primary Topic
Microbial Metabolic Engineering and Bioproduction
Type
article
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article

Crystallization and preliminary X-ray crystallographic studies of AfeH from Acimetobacter sp. DL-2

Huiling Tang, Yan Huang, Xiaoran Zhang, Y. Y. Duan
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Acta Crystallographica Section F Structural Biology Communications
Microbial Metabolic Engineering and Bioproduction
article

Crystallization and preliminary X-ray crystallographic studies of AfeH from Acimetobacter sp. DL-2

Huiling Tang, Yan Huang, Xiaoran Zhang, Y. Y. Duan
article en

Abstract

Fenoxaprop-P-ethyl (FE) is widely applied as a post-emergence aryloxyphenoxy propionate (AOPP) herbicide in agriculture. A novel FE hydrolase esterase from Acinetobacter sp. DL-2 (AfeH) was identified which belongs to the family IV carboxylesterases and shows less than 30% identity to other reported homologues with known structure. In order to understand the catalytic mechanism, recombinant AfeH was prepared in Escherichia coli and crystallized using the sitting-drop vapor-diffusion method. X-ray diffraction data were collected to 1.9 Å resolution. The crystal belonged to space group P12<sub>1</sub>1, with unit-cell parameters a = 84.27, b = 46.74, c = 258.68 Å. The Matthews coefficient (V<sub>M</sub>) was calculated to be 2.43 Å<sup>3</sup> Da<sup>-1</sup>, which corresponds to a solvent content of 49.4%, suggesting the presence of three monomers in the crystallographic asymmetric unit. The crystal was assessed to be suitable for further structural determination, which is currently in progress.

Acta Crystallographica Section F Structural Biology CommunicationsVol. 81(1)
Nanjing Agricultural University (CN), Jiangsu Food and Pharmaceutical Science College (CN), Ministry of Agriculture and Rural Affairs (CN)
Zero hunger
Openalex Percentile: Top 79%
Microbial Metabolic Engineering and Bioproduction
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