Mutational disparities in colorectal cancers of White Americans, Alabama African Americans, And Oklahoma American Indians

The high incidence and mortality rates of colorectal cancer (CRC) in Alabama African Americans (AAs) and Oklahoma American Indians (AIs) are recognized as cancer disparities, yet the underlying causes have been poorly demonstrated. By evaluating CRC whole-exome sequencing and mutational profiles, here we report sets of mutated genes whose frequencies differed significantly (p < 0.05) in a race-specific manner. Secondary screening with cancer database identified "survival-critical genes (SCGs)" (i.e., genes whose mutations/alterations are associated with significant differences in the patients' survival rates) among the differentially mutated genes. Notable SCGs with race-pronounced variants were different from DEGs and their involved pathways included nucleotide catabolism and cell cycle checkpoints for AAs, and extracellular matrix organization for AIs. The inclusion of these SCGs with race-pronounced variants in the clinical CRC next-generation sequencing panels and the development of targeting drugs will serve as refinements for precision medicine to overcome racial disparities in health outcomes of CRC.

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Publication Details

Journal
npj Precision Oncology
Published
2024-12-23
DOI
https://doi.org/10.1038/s41698-024-00782-9
Primary Topic
Genetic factors in colorectal cancer
Type
article
Field-Weighted Citation Impact
0.00

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article

Mutational disparities in colorectal cancers of White Americans, Alabama African Americans, And Oklahoma American Indians

Katherine T. Morris, Dharambir K. Sanghera, Upender Manne, Hiroshi Yamada et al.
1 links
npj Precision Oncology
Genetic factors in colorectal cancer
article

Mutational disparities in colorectal cancers of White Americans, Alabama African Americans, And Oklahoma American Indians

Katherine T. Morris, Dharambir K. Sanghera, Upender Manne, Hiroshi Yamada, Chao Xu, Madhusmita Rout, Farrukh Afaq, Philip H. O’Neill, Chinthalapally V. Rao
article en

Abstract

The high incidence and mortality rates of colorectal cancer (CRC) in Alabama African Americans (AAs) and Oklahoma American Indians (AIs) are recognized as cancer disparities, yet the underlying causes have been poorly demonstrated. By evaluating CRC whole-exome sequencing and mutational profiles, here we report sets of mutated genes whose frequencies differed significantly (p < 0.05) in a race-specific manner. Secondary screening with cancer database identified "survival-critical genes (SCGs)" (i.e., genes whose mutations/alterations are associated with significant differences in the patients' survival rates) among the differentially mutated genes. Notable SCGs with race-pronounced variants were different from DEGs and their involved pathways included nucleotide catabolism and cell cycle checkpoints for AAs, and extracellular matrix organization for AIs. The inclusion of these SCGs with race-pronounced variants in the clinical CRC next-generation sequencing panels and the development of targeting drugs will serve as refinements for precision medicine to overcome racial disparities in health outcomes of CRC.

npj Precision OncologyVol. 8(1)
University of Alabama at Birmingham Hospital (US), University of Oklahoma Medical Center (US), University of Alabama at Birmingham (US), Oklahoma City VA Medical Center (US), University of Oklahoma Health Sciences Center (US)
American Cancer Society, National Institutes of Health, University of Oklahoma Health Sciences Center, Stephenson Cancer Center, National Cancer Institute, National Institute of General Medical Sciences, National Center for Research Resources
Good health and well-being
Openalex Percentile: Top 61%
Genetic factors in colorectal cancer
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