Genome-Wide Analysis of the PYL Gene Family in Betula platyphylla and Its Responses to Abiotic Stresses

Abscisic acid (ABA) is a key phytohormone that participates in various plant biological processes, such as seed germination, senescence, stomatal movement, and flowering. In the ABA signal transduction pathway, Pyrabactin Resistance 1 (PYR1)/PYR1-Like (PYL)/Regulatory Component is the core module for ABA perception. In this study, a total of 12 PYL family members were identified in birch (<i>Betula platyphylla</i> Suk.) from a genome-wide range that can be divided into 3 subgroups according to their evolutionary relationships. The physiochemical properties of the 12 <i>BpPYL</i>s were characterized, and the members of the same subgroups share more similar exon-intron and motif patterns. The results of synteny analysis showed two syntenic gene pairs within BpPYL family members and 12, 8, 19, and 6 syntenic gene pairs between <i>BpPYL</i>s and <i>AtPYL</i>s, <i>OsPYL</i>s, <i>PtPYL</i>s, and <i>ZmPYL</i>s, respectively. Multiple <i>cis</i>-acting elements were identified in the promoters of <i>BpPYL</i>s, including stress response, phytohormone signaling, and growth and development. The results of GO and KEGG enrichment analysis showed that <i>BpPYL</i>s were enriched in the pathways mainly related to ABA signaling and cell communication. The results of RT-qPCR verified the expressional responses of <i>BpPYL</i>s to ABA, salt, and PEG treatments. Furthermore, the positive roles of <i>BpPYL3</i> and <i>BpPYL11</i> were proven by using salt-tolerant yeast transformation. This study provides a reference for research on ABA signal transduction and forest tree responses upon abiotic stresses.

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Journal
International Journal of Molecular Sciences
Published
2024-12-23
DOI
https://doi.org/10.3390/ijms252413728
Primary Topic
Plant Stress Responses and Tolerance
Type
article
Field-Weighted Citation Impact
0.00

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article

Genome-Wide Analysis of the PYL Gene Family in Betula platyphylla and Its Responses to Abiotic Stresses

Su Chen, Xiang Zhang, Ruiqi Wang, Jiajie Yu
1 links
International Journal of Molecular Sciences
Plant Stress Responses and Tolerance
article

Genome-Wide Analysis of the PYL Gene Family in Betula platyphylla and Its Responses to Abiotic Stresses

Su Chen, Xiang Zhang, Ruiqi Wang, Jiajie Yu
article en

Abstract

Abscisic acid (ABA) is a key phytohormone that participates in various plant biological processes, such as seed germination, senescence, stomatal movement, and flowering. In the ABA signal transduction pathway, Pyrabactin Resistance 1 (PYR1)/PYR1-Like (PYL)/Regulatory Component is the core module for ABA perception. In this study, a total of 12 PYL family members were identified in birch (<i>Betula platyphylla</i> Suk.) from a genome-wide range that can be divided into 3 subgroups according to their evolutionary relationships. The physiochemical properties of the 12 <i>BpPYL</i>s were characterized, and the members of the same subgroups share more similar exon-intron and motif patterns. The results of synteny analysis showed two syntenic gene pairs within BpPYL family members and 12, 8, 19, and 6 syntenic gene pairs between <i>BpPYL</i>s and <i>AtPYL</i>s, <i>OsPYL</i>s, <i>PtPYL</i>s, and <i>ZmPYL</i>s, respectively. Multiple <i>cis</i>-acting elements were identified in the promoters of <i>BpPYL</i>s, including stress response, phytohormone signaling, and growth and development. The results of GO and KEGG enrichment analysis showed that <i>BpPYL</i>s were enriched in the pathways mainly related to ABA signaling and cell communication. The results of RT-qPCR verified the expressional responses of <i>BpPYL</i>s to ABA, salt, and PEG treatments. Furthermore, the positive roles of <i>BpPYL3</i> and <i>BpPYL11</i> were proven by using salt-tolerant yeast transformation. This study provides a reference for research on ABA signal transduction and forest tree responses upon abiotic stresses.

International Journal of Molecular SciencesVol. 25(24)
Northeast Forestry University (CN), Eastern Liaoning University (CN)
Northeast Forestry University, Fundamental Research Funds for the Central Universities, State Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry
Life in Land
Openalex Percentile: Top 86%
Plant Stress Responses and Tolerance
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