A self-powered millifluidic device driven by triboelectric generator for the label-free and real-time detection of DNA hybridization

• A self-powered point-of-need DNA biosensor is designed using the amalgamation of millifluidics and triboelectric generator technologies. • A hybridization efficiency of 92% is attained by tuning the target DNA flow rate and probe DNA density in the reaction-limited regime. • The formation of EDL across the channel yields an electrophoresis field altering the triboelectric data in the presence of target DNA. • An ultrahigh sensitivity, 1.469 VnM -1 cm -2 , is achieved in the contact-separation mode. • The complementary and non-complementary target DNA sequences are differentiated based on the number of base pairs and hybridization kinetics governing the net charge. In this paper, a novel, versatile, easy-to-operate, highly sensitive triboelectrification-induced platform is suggested for the detection of DNA hybridization without electric poling and labeling the targeted DNA. Single-stranded DNA probes are tethered on PBASE-functionalized graphene electrode surface via intermolecular interactions to specifically capture the complementary target DNA sequence. For this purpose, the biosensing interface is set up in a millifluidic chamber, integrated into the dual-mode conductor-to-dielectric triboelectric generator to stimulate the genosensor and scavenge the signal simultaneously. Numerical simulations are carried out using a two-dimensional model in COMSOL Multiphysics software. In line with the heterogeneous genoassay modeling, flow variables are tuned to attain the optimal hybridization efficiency equal to 92%. The formation of an electric double layer at the electrode-electrolyte interface is figured out through mechano‐triboelectric transduction so that the generated output signal is proportional to the target DNA concentration. Accordingly, DNA: DNA duplexes could be addressed at concentrations as low as 10 pM in PBS solution (pH 7.4) with an ultrahigh sensitivity of 1.469 VnM -1 cm -2 and linearity over the full testing concentration range, 30 pM−10 nM, for the contact-separation scheme. The results of sequence mismatch analysis at the nucleotide level confirm the salient specificity of the proposed sensor chip taking the length of probe/target strands and binding constants of the hybridization reaction into account. The self-powered genosensor can offer a vast clinical potential use, in particular in the timely diagnosis of inherited diseases, genotyping of pathogens, identification of co-infections, and cancer screening, ranging from outbreak management to therapeutic orientation and patient follow-up.

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Publication Details

Journal
Results in Engineering
Published
2024-12-22
DOI
https://doi.org/10.1016/j.rineng.2024.103800
Citations
4
Primary Topic
Advanced Sensor and Energy Harvesting Materials
Type
article
Field-Weighted Citation Impact
0.74

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article

A self-powered millifluidic device driven by triboelectric generator for the label-free and real-time detection of DNA hybridization

Sheida Bagherzadeh‐Nobari, Tara Ghafouri, Negin Manavizadeh
4 citations
Results in Engineering
Advanced Sensor and Energy Harvesting Materials
0.74
article

A self-powered millifluidic device driven by triboelectric generator for the label-free and real-time detection of DNA hybridization

Sheida Bagherzadeh‐Nobari, Tara Ghafouri, Negin Manavizadeh
article en
4 citations

Abstract

• A self-powered point-of-need DNA biosensor is designed using the amalgamation of millifluidics and triboelectric generator technologies. • A hybridization efficiency of 92% is attained by tuning the target DNA flow rate and probe DNA density in the reaction-limited regime. • The formation of EDL across the channel yields an electrophoresis field altering the triboelectric data in the presence of target DNA. • An ultrahigh sensitivity, 1.469 VnM -1 cm -2 , is achieved in the contact-separation mode. • The complementary and non-complementary target DNA sequences are differentiated based on the number of base pairs and hybridization kinetics governing the net charge. In this paper, a novel, versatile, easy-to-operate, highly sensitive triboelectrification-induced platform is suggested for the detection of DNA hybridization without electric poling and labeling the targeted DNA. Single-stranded DNA probes are tethered on PBASE-functionalized graphene electrode surface via intermolecular interactions to specifically capture the complementary target DNA sequence. For this purpose, the biosensing interface is set up in a millifluidic chamber, integrated into the dual-mode conductor-to-dielectric triboelectric generator to stimulate the genosensor and scavenge the signal simultaneously. Numerical simulations are carried out using a two-dimensional model in COMSOL Multiphysics software. In line with the heterogeneous genoassay modeling, flow variables are tuned to attain the optimal hybridization efficiency equal to 92%. The formation of an electric double layer at the electrode-electrolyte interface is figured out through mechano‐triboelectric transduction so that the generated output signal is proportional to the target DNA concentration. Accordingly, DNA: DNA duplexes could be addressed at concentrations as low as 10 pM in PBS solution (pH 7.4) with an ultrahigh sensitivity of 1.469 VnM -1 cm -2 and linearity over the full testing concentration range, 30 pM−10 nM, for the contact-separation scheme. The results of sequence mismatch analysis at the nucleotide level confirm the salient specificity of the proposed sensor chip taking the length of probe/target strands and binding constants of the hybridization reaction into account. The self-powered genosensor can offer a vast clinical potential use, in particular in the timely diagnosis of inherited diseases, genotyping of pathogens, identification of co-infections, and cancer screening, ranging from outbreak management to therapeutic orientation and patient follow-up.

Results in EngineeringVol. 25
Islamic Azad University, Tehran (IR), Islamic Azad University South Tehran Branch (IR), K. N. Toosi University of Technology (IR)
Iran National Science Foundation
Affordable and clean energy
Openalex Percentile: Top 31%
Advanced Sensor and Energy Harvesting Materials
0.74
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