Conformational Analysis of Swallowtail Motifs in Porphyrins

Aqueous solubilization of porphyrins, often accomplished with appended polar aryl groups, can also be achieved with symmetrically branched alkyl (i.e., swallowtail) groups terminated with polar moieties. Here, carboxylic acids are employed as termini (versus prior phosphono- or phosphoester termini) in designs of <i>trans</i>-AB-porphyrins bearing a single swallowtail group (A) or <i>trans</i>-A<sub>2</sub>-porphyrins bearing two swallowtail groups. Variable-temperature <sup>1</sup>H NMR studies (-60 to 97 °C) revealed that the 4-heptanedioic acid group at the meso-position of the free base porphyrin rotates with rate constant 5 s<sup>-1</sup> (310 K) and Arrhenius energy barrier <i>E</i><sub>a</sub> = 11.5 kcal/mol, whereas an isopropyl group undergoes rotation ∼1000-times faster (<i>k</i> = 5770 s<sup>-1</sup>). The interconversion is sufficiently fast that conformational diastereomers, as when two such swallowtail groups are present in a <i>trans</i>-A<sub>2</sub>-porphyrin, would not be isolable at room temperature (Class I atropisomers). DFT calculations (4 porphyrins containing the isopropyl or 4-heptanedioic acid groups) showed that the lowest energy conformer contains the swallowtail C-H unit in the plane of the porphyrin. The presence of one or two 4-heptanedioic acid moieties imparted solubility of the porphyrin in phosphate-buffered saline (PBS). The results suggest applications in the life sciences where compact, aqueous-soluble porphyrins are desired.

Authors

Institutions

Publication Details

Journal
The Journal of Organic Chemistry
Published
2024-12-20
DOI
https://doi.org/10.1021/acs.joc.4c02059
Citations
3
Primary Topic
Porphyrin and Phthalocyanine Chemistry
Type
article
Field-Weighted Citation Impact
0.35

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Conformational Analysis of Swallowtail Motifs in Porphyrins

Phuong-Lien Doan Cao, Phattananawee Nalaoh, Milena Jovanović, Khiem Chau Nguyen et al.
3 citations
The Journal of Organic Chemistry
Porphyrin and Phthalocyanine Chemistry
0.35
article

Conformational Analysis of Swallowtail Motifs in Porphyrins

Phuong-Lien Doan Cao, Phattananawee Nalaoh, Milena Jovanović, Khiem Chau Nguyen, Jonathan S. Lindsey, Alexander A. Nevzorov
article en
3 citations

Abstract

Aqueous solubilization of porphyrins, often accomplished with appended polar aryl groups, can also be achieved with symmetrically branched alkyl (i.e., swallowtail) groups terminated with polar moieties. Here, carboxylic acids are employed as termini (versus prior phosphono- or phosphoester termini) in designs of <i>trans</i>-AB-porphyrins bearing a single swallowtail group (A) or <i>trans</i>-A<sub>2</sub>-porphyrins bearing two swallowtail groups. Variable-temperature <sup>1</sup>H NMR studies (-60 to 97 °C) revealed that the 4-heptanedioic acid group at the meso-position of the free base porphyrin rotates with rate constant 5 s<sup>-1</sup> (310 K) and Arrhenius energy barrier <i>E</i><sub>a</sub> = 11.5 kcal/mol, whereas an isopropyl group undergoes rotation ∼1000-times faster (<i>k</i> = 5770 s<sup>-1</sup>). The interconversion is sufficiently fast that conformational diastereomers, as when two such swallowtail groups are present in a <i>trans</i>-A<sub>2</sub>-porphyrin, would not be isolable at room temperature (Class I atropisomers). DFT calculations (4 porphyrins containing the isopropyl or 4-heptanedioic acid groups) showed that the lowest energy conformer contains the swallowtail C-H unit in the plane of the porphyrin. The presence of one or two 4-heptanedioic acid moieties imparted solubility of the porphyrin in phosphate-buffered saline (PBS). The results suggest applications in the life sciences where compact, aqueous-soluble porphyrins are desired.

The Journal of Organic ChemistryVol. 90(1)
North Carolina State University (US), University of Tennessee at Knoxville (US)
Division of Chemistry, Division of Molecular and Cellular Biosciences, Basic Energy Sciences, Translational Impacts
Zero hunger
Openalex Percentile: Top 42%
Porphyrin and Phthalocyanine Chemistry
0.35
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.