High-quality chromosome-scale genome assembly of Laudakia wui (Laudakia, Agamidae)

The Laudakia wui, also known as Wui's rock agama, is a species of agamid lizard endemic to Xizang, China, and is distributed within the Yarlung Zangbo River basin in the Nyingchi city. In order to better understand its ecology, population dynamics, and conservation requirements, we have generated a high-quality chromosome-scale genome with genome size of 1.78 Gb (scaffold N50 = 195.02 Mb), and a BUSCO score of 93.2%. We also identified 20,805 protein-coding genes with gene annotation complete BUSCO were 95.7%, of which 96.23% were functionally annotated. In summary, this genomic information of L. wui is crucial for uncovering its unique evolutionary adaptations and understanding its role in the ecosystem, and is essential for developing targeted conservation strategies and managing biodiversity in this ecologically sensitive region.

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Publication Details

Journal
Scientific Data
Published
2024-12-21
DOI
https://doi.org/10.1038/s41597-024-04284-y
Citations
1
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
0.23
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article

High-quality chromosome-scale genome assembly of Laudakia wui (Laudakia, Agamidae)

Dian‐Cheng Yang, Shiyang Weng, Yanchao Liu, Cong Wei et al.
1 citations
Scientific Data
Genomics and Phylogenetic Studies
0.23
article

High-quality chromosome-scale genome assembly of Laudakia wui (Laudakia, Agamidae)

Dian‐Cheng Yang, Shiyang Weng, Yanchao Liu, Cong Wei, Le Yang
article en
1 citations

Abstract

The Laudakia wui, also known as Wui's rock agama, is a species of agamid lizard endemic to Xizang, China, and is distributed within the Yarlung Zangbo River basin in the Nyingchi city. In order to better understand its ecology, population dynamics, and conservation requirements, we have generated a high-quality chromosome-scale genome with genome size of 1.78 Gb (scaffold N50 = 195.02 Mb), and a BUSCO score of 93.2%. We also identified 20,805 protein-coding genes with gene annotation complete BUSCO were 95.7%, of which 96.23% were functionally annotated. In summary, this genomic information of L. wui is crucial for uncovering its unique evolutionary adaptations and understanding its role in the ecosystem, and is essential for developing targeted conservation strategies and managing biodiversity in this ecologically sensitive region.

Scientific DataVol. 11(1)
Huangshan University (CN), Provincia Autonoma di Trento (IT)
Life in Land
Openalex Percentile: Top 40%
Genomics and Phylogenetic Studies
0.23
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High-quality chromosome-scale genome assembly of Laudakia wui (Laudakia, Agamidae) — Dian‐Cheng Yang, Shiyang Weng, et al. · Scientific Data (2024) | TGRS Research Map | TGRS