Single‐Molecule Electrical Conductance in Z‐form DNA:RNA

Nucleic acids have emerged as new materials with promising applications in nanotechnology, molecular electronics, and biosensing, but their electronic properties, especially at the single-molecule level, are largely underexplored. The Z-form is an exotic left-handed helical oligonucleotide conformation that may be involved in critical biological processes such as the regulation of gene expression and epigenetic processes. In this work, the electrical conductance of individual Guanine Cytosine (GC)-rich DNA:RNA molecules is measured in physiological buffer and 2,2,2-Trifluoroethanol (TFE) solvent, corresponding to the natural (right-handed helix) A-form typical in DNA:RNA hybrids and the (left-handed) Z-form conformations, respectively. Single-molecule conductance measurements are performed using the Scanning Tunneling Microscopy (STM)-assisted break-junction method in the so-called "blinking" approach, recording the spontaneous formation of single-biomolecule junctions and performing statistical analysis of the signals. Circular Dichroism (CD) experiments and ab initio calculations are also done to rationalize the measured molecular conductivity with a simple structural and electronic model. These results show that the electrical conductivity of the Z-form is one order of magnitude lower than that of the more compact A-form. The longer molecular length and higher energy for the Highest Occupied Molecular Orbital (HOMO) of the Z-form account for the differences in single-molecule conductance observed experimentally.

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Publication Details

Journal
Small
Published
2024-12-18
DOI
https://doi.org/10.1002/smll.202408459
Citations
2
Primary Topic
Advanced biosensing and bioanalysis techniques
Type
article
Field-Weighted Citation Impact
0.47

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article

Single‐Molecule Electrical Conductance in Z‐form DNA:RNA

Jesús Jover, Juan M. Artés, Eliseo Ruíz, Albert C. Aragonès et al.
2 citations
Small
Advanced biosensing and bioanalysis techniques
0.47
article

Single‐Molecule Electrical Conductance in Z‐form DNA:RNA

Jesús Jover, Juan M. Artés, Eliseo Ruíz, Albert C. Aragonès, Mauricio R. Aguilar
article en
2 citations

Abstract

Nucleic acids have emerged as new materials with promising applications in nanotechnology, molecular electronics, and biosensing, but their electronic properties, especially at the single-molecule level, are largely underexplored. The Z-form is an exotic left-handed helical oligonucleotide conformation that may be involved in critical biological processes such as the regulation of gene expression and epigenetic processes. In this work, the electrical conductance of individual Guanine Cytosine (GC)-rich DNA:RNA molecules is measured in physiological buffer and 2,2,2-Trifluoroethanol (TFE) solvent, corresponding to the natural (right-handed helix) A-form typical in DNA:RNA hybrids and the (left-handed) Z-form conformations, respectively. Single-molecule conductance measurements are performed using the Scanning Tunneling Microscopy (STM)-assisted break-junction method in the so-called "blinking" approach, recording the spontaneous formation of single-biomolecule junctions and performing statistical analysis of the signals. Circular Dichroism (CD) experiments and ab initio calculations are also done to rationalize the measured molecular conductivity with a simple structural and electronic model. These results show that the electrical conductivity of the Z-form is one order of magnitude lower than that of the more compact A-form. The longer molecular length and higher energy for the Highest Occupied Molecular Orbital (HOMO) of the Z-form account for the differences in single-molecule conductance observed experimentally.

SmallVol. 21(5)
University of Massachusetts Lowell (US), Universitat de Barcelona (ES)
European Commission, Generalitat de Catalunya, Institució Catalana de Recerca i Estudis Avançats, Max-Planck-Gesellschaft, Ministerio de Ciencia e Innovación, Universitat de Barcelona, California State University, Chico
Openalex Percentile: Top 33%
Advanced biosensing and bioanalysis techniques
0.47
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