Development of an infiltration-based RNA preservation method for cryogen-free storage of leaves for gene expression analyses in field-grown plants

This study showed that the developed infiltration method was effective in preserving the transcriptome status of rice and sorghum leaves when liquid nitrogen or a deep freezer is not available. The developed method was useful for diagnosing plants in the field based on the expression of nutrient-responsive marker genes. Moreover, the method used to protect RNA samples from degradation during transportation offers the possibility to use them for RNA-seq. This novel technique could pave the way for revealing the molecular basis of plant phenotypes by accelerating gene expression analyses using plant samples that are unique in the field.

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Publication Details

Journal
Plant Methods
Published
2024-12-18
DOI
https://doi.org/10.1186/s13007-024-01311-2
Citations
2
Primary Topic
Molecular Biology Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.47

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article

Development of an infiltration-based RNA preservation method for cryogen-free storage of leaves for gene expression analyses in field-grown plants

Yoshiaki Ueda
2 citations
Plant Methods
Molecular Biology Techniques and Applications
0.47
article

Development of an infiltration-based RNA preservation method for cryogen-free storage of leaves for gene expression analyses in field-grown plants

Yoshiaki Ueda
article en
2 citations

Abstract

This study showed that the developed infiltration method was effective in preserving the transcriptome status of rice and sorghum leaves when liquid nitrogen or a deep freezer is not available. The developed method was useful for diagnosing plants in the field based on the expression of nutrient-responsive marker genes. Moreover, the method used to protect RNA samples from degradation during transportation offers the possibility to use them for RNA-seq. This novel technique could pave the way for revealing the molecular basis of plant phenotypes by accelerating gene expression analyses using plant samples that are unique in the field.

Plant MethodsVol. 20(1)
Japan International Research Center for Agricultural Sciences (JP)
Rheinische Friedrich-Wilhelms-Universität Bonn, Japan International Research Center for Agricultural Sciences
Life in Land
Openalex Percentile: Top 33%
Molecular Biology Techniques and Applications
0.47
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Development of an infiltration-based RNA preservation method for cryogen-free storage of leaves for gene expression analyses in field-grown plants — Yoshiaki Ueda · Plant Methods (2024) | TGRS Research Map | TGRS