TranSLUCEnT: Transferred Sequential Lung Ultrasound Characteristic Encodings-based Transformer for Lung Ultrasound Pattern Classification in Premature Neonates

Neonatal respiratory disorders present significant challenges in clinical settings, often demanding rapid and accurate diagnostic solutions for effective patient management. In recent times, lung ultrasound (LUS) has played a notable role in the evaluation of neonatal patients affected by respiratory diseases. However, limited work has been done to automate the process to assist clinicians. To this extent, sufficient representative data is required for reliable training of deep learning (DL)-based methods. To address the challenge of the limited availability of annotated data, this study aims to utilize domain knowledge from an existing adult patient population for effective video-level classification of LUS patterns in newborns. This study introduces TranSLUCEnT, a transformer-based video-level LUS pattern classification model that employs the transfer of domain knowledge from adults to newborns. To this extent, it uses frame-level encodings of LUS data from newborns, extracted from a ResNet-18 model previously trained on LUS data from adults. This allows the model to effectively capture and transfer relevant features to the task of analyzing LUS data from newborns. The proposed model is evaluated on 417 neonatal videos from 35 patients in a leave-one-out cross-validation manner, leaving data from a single exam out in each fold. Results showed that TranSLUCEnT achieved a mean video-level accuracy of 76.2% w.r.t. the majority label provided by 3 clinical operators as ground truth. In comparison, the state-of-the-art video vision transformer (ViViT), when trained from scratch, achieved an accuracy of 49.8%. Moreover, while ViViT processes N tokens per frame in a video of M frames (N × M tokens), TranSLUCEnT processes only M tokens. As a result, it achieves a significantly higher video classification performance with lower computational cost compared to the state-of-the-art ViViT model.

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Published
2024-09-22
DOI
https://doi.org/10.1109/uffc-js60046.2024.10793539
Citations
1
Primary Topic
Ultrasound in Clinical Applications
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article
Field-Weighted Citation Impact
0.42
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article

TranSLUCEnT: Transferred Sequential Lung Ultrasound Characteristic Encodings-based Transformer for Lung Ultrasound Pattern Classification in Premature Neonates

Giovanni Iacca, Umair Khan, Giulia Dognini, Libertario Demi et al.
1 citations
Ultrasound in Clinical Applications
0.42
article

TranSLUCEnT: Transferred Sequential Lung Ultrasound Characteristic Encodings-based Transformer for Lung Ultrasound Pattern Classification in Premature Neonates

Giovanni Iacca, Umair Khan, Giulia Dognini, Libertario Demi, Noreen Fatima, Federico Cattaneo, Emanuela Zannin, Camilla Rigotti, Maria Luisa Ventura, Xi Han
article en
1 citations

Abstract

Neonatal respiratory disorders present significant challenges in clinical settings, often demanding rapid and accurate diagnostic solutions for effective patient management. In recent times, lung ultrasound (LUS) has played a notable role in the evaluation of neonatal patients affected by respiratory diseases. However, limited work has been done to automate the process to assist clinicians. To this extent, sufficient representative data is required for reliable training of deep learning (DL)-based methods. To address the challenge of the limited availability of annotated data, this study aims to utilize domain knowledge from an existing adult patient population for effective video-level classification of LUS patterns in newborns. This study introduces TranSLUCEnT, a transformer-based video-level LUS pattern classification model that employs the transfer of domain knowledge from adults to newborns. To this extent, it uses frame-level encodings of LUS data from newborns, extracted from a ResNet-18 model previously trained on LUS data from adults. This allows the model to effectively capture and transfer relevant features to the task of analyzing LUS data from newborns. The proposed model is evaluated on 417 neonatal videos from 35 patients in a leave-one-out cross-validation manner, leaving data from a single exam out in each fold. Results showed that TranSLUCEnT achieved a mean video-level accuracy of 76.2% w.r.t. the majority label provided by 3 clinical operators as ground truth. In comparison, the state-of-the-art video vision transformer (ViViT), when trained from scratch, achieved an accuracy of 49.8%. Moreover, while ViViT processes N tokens per frame in a video of M frames (N × M tokens), TranSLUCEnT processes only M tokens. As a result, it achieves a significantly higher video classification performance with lower computational cost compared to the state-of-the-art ViViT model.

University of Trento (IT), Azienda Ospedaliera San Gerardo (IT), Istituti di Ricovero e Cura a Carattere Scientifico (IT)
Zero hunger
Openalex Percentile: Top 32%
Ultrasound in Clinical Applications
0.42
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