MambaVesselNet: A Novel Approach to Blood Vessel Segmentation Based on State-Space Models

Three-dimensional blood vessel segmentation is an important and challenging task that faces two main difficulties: (1) blood vessel structures are small, making them hard to capture by the network, and vessel edges are difficult to segment accurately; (2) false positives are prone to occur due to the presence of artifacts and noise. This paper proposes a novel blood vessel segmentation method called MambaVesselNet. This method is based on a state-space model and employs a selective state-space time series modeling strategy to achieve a larger receptive field. To better capture fine vascular structures and accurately segment edges, this paper introduces an edge enhancement module and a feature selection module. In terms of data preprocessing, nnUNet's preprocessing strategy is adopted to ensure spatial consistency of the input data. Evaluation on three standard vascular segmentation benchmarks shows that MambaVesselNet achieves state-of-the-art performance. Specifically, on cardiovascular and liver vessel datasets, the Dice coefficient is improved by 1.38% and 2.69%, respectively. The contributions of this paper include the proposal of a new module for enhancing blood vessel edge features, the development of a feature selection module with long sequence modeling capability, and the adoption of nnUNet's data preprocessing strategy, setting a new benchmark for blood vessel segmentation technology.

Authors

Institutions

Publication Details

Journal
IEEE Journal of Biomedical and Health Informatics
Published
2024-12-18
DOI
https://doi.org/10.1109/jbhi.2024.3517642
Citations
6
Primary Topic
Retinal Imaging and Analysis
Type
article
Field-Weighted Citation Impact
2.43

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

MambaVesselNet: A Novel Approach to Blood Vessel Segmentation Based on State-Space Models

Gang Zhao, Shoujun Zhou, Fuxia Yang, Bin Li et al.
6 citations
IEEE Journal of Biomedical and Health Informatics
Retinal Imaging and Analysis
2.43
article

MambaVesselNet: A Novel Approach to Blood Vessel Segmentation Based on State-Space Models

Gang Zhao, Shoujun Zhou, Fuxia Yang, Bin Li, Tianyong Liu, Chengwu Xu, Guojia Fan, Zhiqing Zhang
article en
6 citations

Abstract

Three-dimensional blood vessel segmentation is an important and challenging task that faces two main difficulties: (1) blood vessel structures are small, making them hard to capture by the network, and vessel edges are difficult to segment accurately; (2) false positives are prone to occur due to the presence of artifacts and noise. This paper proposes a novel blood vessel segmentation method called MambaVesselNet. This method is based on a state-space model and employs a selective state-space time series modeling strategy to achieve a larger receptive field. To better capture fine vascular structures and accurately segment edges, this paper introduces an edge enhancement module and a feature selection module. In terms of data preprocessing, nnUNet's preprocessing strategy is adopted to ensure spatial consistency of the input data. Evaluation on three standard vascular segmentation benchmarks shows that MambaVesselNet achieves state-of-the-art performance. Specifically, on cardiovascular and liver vessel datasets, the Dice coefficient is improved by 1.38% and 2.69%, respectively. The contributions of this paper include the proposal of a new module for enhancing blood vessel edge features, the development of a feature selection module with long sequence modeling capability, and the adoption of nnUNet's data preprocessing strategy, setting a new benchmark for blood vessel segmentation technology.

IEEE Journal of Biomedical and Health InformaticsVol. 29(3)
Chinese Academy of Sciences (CN), General Hospital of Guangzhou Military Command (CN), Shenzhen Institutes of Advanced Technology (CN), Shenzhen Pingle Orthopedic Hospital (CN), Northeast Petroleum University (CN), Northeastern University (CN)
Natural Science Foundation of Guangdong Province
Life below water
Openalex Percentile: Top 10%
Retinal Imaging and Analysis
2.43
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.