A global dataset of tree hydraulic and structural traits imputed from phylogenetic relationships

We present a dataset of plant hydraulic and structural traits imputed for 55,779 tree species based on TRY plant trait dataset observations and phylogenetic relationships. We collected plant trait values for maximum stomatal conductance (gs<sub>MAX</sub>), xylem pressure at 12%, 50%, and 88% conductance loss (P12, P50, P88), maximum observed rooting depth (rd<sub>MAX</sub>), photosynthetic Water Use Efficiency (WUE), maximum plant height (height), Specific Leaf Area (SLA), and leaf Nitrogen content (LeafN). We demonstrated that each of these traits exhibited remarkably large phylogenetic signals across all land plants. Based on the strength of this signal we then developed random forest (RF) models trained on TRY trait data to impute the traits of previously unstudied tree species using Phylogenetic Eigenvector Maps. We quantified imputed trait uncertainty by fitting RF model test dataset residuals to skew exponential power distributions accounting for heteroscedasticity, demonstrating encouraging lack of biases in the imputed dataset. The resulting dataset of imputed trait values can support global analyses of plant trait variations and species-level parameterization of earth systems models.

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Publication Details

Journal
Scientific Data
Published
2024-12-18
DOI
https://doi.org/10.1038/s41597-024-04254-4
Citations
6
Primary Topic
Plant Water Relations and Carbon Dynamics
Type
article
Field-Weighted Citation Impact
1.70

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article

A global dataset of tree hydraulic and structural traits imputed from phylogenetic relationships

Pablo Sanchez‐Martinez, James Knighton, Leander D. L. Anderegg
6 citations
Scientific Data
Plant Water Relations and Carbon Dynamics
1.70
article

A global dataset of tree hydraulic and structural traits imputed from phylogenetic relationships

Pablo Sanchez‐Martinez, James Knighton, Leander D. L. Anderegg
article en
6 citations

Abstract

We present a dataset of plant hydraulic and structural traits imputed for 55,779 tree species based on TRY plant trait dataset observations and phylogenetic relationships. We collected plant trait values for maximum stomatal conductance (gs<sub>MAX</sub>), xylem pressure at 12%, 50%, and 88% conductance loss (P12, P50, P88), maximum observed rooting depth (rd<sub>MAX</sub>), photosynthetic Water Use Efficiency (WUE), maximum plant height (height), Specific Leaf Area (SLA), and leaf Nitrogen content (LeafN). We demonstrated that each of these traits exhibited remarkably large phylogenetic signals across all land plants. Based on the strength of this signal we then developed random forest (RF) models trained on TRY trait data to impute the traits of previously unstudied tree species using Phylogenetic Eigenvector Maps. We quantified imputed trait uncertainty by fitting RF model test dataset residuals to skew exponential power distributions accounting for heteroscedasticity, demonstrating encouraging lack of biases in the imputed dataset. The resulting dataset of imputed trait values can support global analyses of plant trait variations and species-level parameterization of earth systems models.

Scientific DataVol. 11(1)
University of Connecticut (US), University of California, Santa Barbara (US), University of Edinburgh (GB)
National Science Foundation, U.S. Department of Agriculture, National Institute of Food and Agriculture
Openalex Percentile: Top 16%
Plant Water Relations and Carbon Dynamics
1.70
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A global dataset of tree hydraulic and structural traits imputed from phylogenetic relationships — Pablo Sanchez‐Martinez, James Knighton, et al. · Scientific Data (2024) | TGRS Research Map | TGRS