GJFocuser: a Gaussian difference and joint learning-based autofocus method for whole slide imaging

Whole slide imaging (WSI) provides tissue visualization at the cellular level, thereby enhancing the effectiveness of computer-aided diagnostic systems. High-precision autofocusing methods are essential for ensuring the quality of WSI. However, the accuracy of existing autofocusing techniques can be notably affected by variations in staining and sample heterogeneity, particularly without the addition of extra hardware. This study proposes a robust autofocusing method based on the difference between Gaussians (DoG) and joint learning. The DoG emphasizes image edge information that is closely related to focal distance, thereby mitigating the influence of staining variations. The joint learning framework constrains the network's sensitivity to defocus distance, effectively addressing the impact of the differences in sample morphology. We first conduct comparative experiments on public datasets against state-of-the-art methods, with results indicating that our approach achieves cutting-edge performance. Subsequently, we apply this method in a low-cost digital microscopy system, showcasing its effectiveness and versatility in practical scenarios.

Authors

Institutions

Publication Details

Journal
Biomedical Optics Express
Published
2024-12-18
DOI
https://doi.org/10.1364/boe.547119
Citations
5
Primary Topic
Image Processing Techniques and Applications
Type
article
Field-Weighted Citation Impact
1.60

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

GJFocuser: a Gaussian difference and joint learning-based autofocus method for whole slide imaging

Wujie Chen, Zhen‐Li Huang, Zhengxia Wang, caiwei Li
5 citations
Biomedical Optics Express
Image Processing Techniques and Applications
1.60
article

GJFocuser: a Gaussian difference and joint learning-based autofocus method for whole slide imaging

Wujie Chen, Zhen‐Li Huang, Zhengxia Wang, caiwei Li
article en
5 citations

Abstract

Whole slide imaging (WSI) provides tissue visualization at the cellular level, thereby enhancing the effectiveness of computer-aided diagnostic systems. High-precision autofocusing methods are essential for ensuring the quality of WSI. However, the accuracy of existing autofocusing techniques can be notably affected by variations in staining and sample heterogeneity, particularly without the addition of extra hardware. This study proposes a robust autofocusing method based on the difference between Gaussians (DoG) and joint learning. The DoG emphasizes image edge information that is closely related to focal distance, thereby mitigating the influence of staining variations. The joint learning framework constrains the network's sensitivity to defocus distance, effectively addressing the impact of the differences in sample morphology. We first conduct comparative experiments on public datasets against state-of-the-art methods, with results indicating that our approach achieves cutting-edge performance. Subsequently, we apply this method in a low-cost digital microscopy system, showcasing its effectiveness and versatility in practical scenarios.

Biomedical Optics ExpressVol. 16(1)
Hainan University (CN)
National Natural Science Foundation of China, National Key Research and Development Program of China, Major Science and Technology Project of Hainan Province
Openalex Percentile: Top 14%
Image Processing Techniques and Applications
1.60
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.