Dynamic Dofetilide-hERG Channel Model Considering Preferential State Binding and Trapping Properties

Assessment of cardiotoxicity is crucial in the development of new compounds and understandingbinding dynamics is important to study drug effects.We previously developed computational pipeline for generating Markovian drug-hERG channel models that reproduce binding properties.We have tested our methodology with the real IKr blocker dofetilide.Experiments were conducted using hERG transfected HEK cells and the Nanion SyncroPatch 384i.We applied three voltage clamp protocols, named P0, P40 and P-80, to generate the model.A unique IC50 value was also estimated using the CiPA ramp protocol and the model was tested with the Milnes protocol.The model accurately replicates the experimental data recordings with our protocols and the IC50 value is in accordance with the available literature.The model also resembles the behavior observed with the Milnes protocol.We show an experimental proof of concept of a novel methodology for generating dynamic drug models obtained with simple voltage clamp protocols that may constitute a marked improvement in cardiac safety assessment.

Authors

Publication Details

Journal
Computing in cardiology
Published
2024-12-01
DOI
https://doi.org/10.22489/cinc.2024.367
Primary Topic
Advancements in Semiconductor Devices and Circuit Design
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Dynamic Dofetilide-hERG Channel Model Considering Preferential State Binding and Trapping Properties

Lucía Romero, Søren Friis, Fernando Escobar Ropero, Sonja Stoelzle‐Feix et al.
Computing in cardiology
Advancements in Semiconductor Devices and Circuit Design
article

Dynamic Dofetilide-hERG Channel Model Considering Preferential State Binding and Trapping Properties

Lucía Romero, Søren Friis, Fernando Escobar Ropero, Sonja Stoelzle‐Feix, Javier Sáiz, Nouran Adly, Julio Gomis-Tena Dolz
article en

Abstract

Assessment of cardiotoxicity is crucial in the development of new compounds and understandingbinding dynamics is important to study drug effects.We previously developed computational pipeline for generating Markovian drug-hERG channel models that reproduce binding properties.We have tested our methodology with the real IKr blocker dofetilide.Experiments were conducted using hERG transfected HEK cells and the Nanion SyncroPatch 384i.We applied three voltage clamp protocols, named P0, P40 and P-80, to generate the model.A unique IC50 value was also estimated using the CiPA ramp protocol and the model was tested with the Milnes protocol.The model accurately replicates the experimental data recordings with our protocols and the IC50 value is in accordance with the available literature.The model also resembles the behavior observed with the Milnes protocol.We show an experimental proof of concept of a novel methodology for generating dynamic drug models obtained with simple voltage clamp protocols that may constitute a marked improvement in cardiac safety assessment.

Computing in cardiologyVol. 51
Ministerio de Ciencia, Innovación y Universidades, European Commission, Generalitat Valenciana, European Regional Development Fund, Agencia Estatal de Investigación
Openalex Percentile: Top 79%
Advancements in Semiconductor Devices and Circuit Design
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Dynamic Dofetilide-hERG Channel Model Considering Preferential State Binding and Trapping Properties — Lucía Romero, Søren Friis, et al. · Computing in cardiology (2024) | TGRS Research Map | TGRS