An integrative data-driven model simulating C. elegans brain, body and environment interactions

The behavior of an organism is influenced by the complex interplay between its brain, body and environment. Existing data-driven models focus on either the brain or the body-environment. Here we present BAAIWorm, an integrative data-driven model of Caenorhabditis elegans, which consists of two submodels: the brain model and the body-environment model. The brain model was built by multicompartment models with realistic morphology, connectome and neural population dynamics based on experimental data. Simultaneously, the body-environment model used a lifelike body and a three-dimensional physical environment. Through the closed-loop interaction between the two submodels, BAAIWorm reproduced the realistic zigzag movement toward attractors observed in C. elegans. Leveraging this model, we investigated the impact of neural system structure on both neural activities and behaviors. Consequently, BAAIWorm can enhance our understanding of how the brain controls the body to interact with its surrounding environment.

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Publication Details

Journal
Nature Computational Science
Published
2024-12-16
DOI
https://doi.org/10.1038/s43588-024-00738-w
Citations
16
Primary Topic
Genetics, Aging, and Longevity in Model Organisms
Type
article
Field-Weighted Citation Impact
3.64
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article

An integrative data-driven model simulating C. elegans brain, body and environment interactions

Mengdi Zhao, Gan He, Tiejun Huang, Ning Wang et al.
16 citations
Nature Computational Science
Genetics, Aging, and Longevity in Model Organisms
3.64
article

An integrative data-driven model simulating C. elegans brain, body and environment interactions

Mengdi Zhao, Gan He, Tiejun Huang, Ning Wang, Лей Ма, Xiaoyang Ma, Haixin Ma, Xinrui Jiang, Kai Du
article en
16 citations

Abstract

The behavior of an organism is influenced by the complex interplay between its brain, body and environment. Existing data-driven models focus on either the brain or the body-environment. Here we present BAAIWorm, an integrative data-driven model of Caenorhabditis elegans, which consists of two submodels: the brain model and the body-environment model. The brain model was built by multicompartment models with realistic morphology, connectome and neural population dynamics based on experimental data. Simultaneously, the body-environment model used a lifelike body and a three-dimensional physical environment. Through the closed-loop interaction between the two submodels, BAAIWorm reproduced the realistic zigzag movement toward attractors observed in C. elegans. Leveraging this model, we investigated the impact of neural system structure on both neural activities and behaviors. Consequently, BAAIWorm can enhance our understanding of how the brain controls the body to interact with its surrounding environment.

Nature Computational ScienceVol. 4(12)
Peking University (CN), Beijing Academy of Artificial Intelligence (CN)
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Openalex Percentile: Top 6%
Genetics, Aging, and Longevity in Model Organisms
3.64
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