Efficient circular RNA synthesis for potent rolling circle translation

Circular RNA (circRNA) is a candidate for next-generation messenger RNA therapeutics owing to its remarkable stability. Here we describe trans-splicing-based methods for the synthesis of circRNAs over 8,000 nucleotides. The methods are independent of bacterial sequences, outperform the permuted intron-exon method and allow for the incorporation of RNA modifications. The resulting unmodified circRNAs, which incorporate sequences from human 28S ribosomal RNA, display low immunogenicity and are translated more efficiently than permuted intron-exon-derived circRNAs. Additionally, by using viral internal ribosomal entry sites for rolling circle translation, we show that ribosomes can efficiently read through highly structured internal ribosomal entry sites, enhancing the efficiency of rolling circle translation by over 7,000-fold with respect to previous constructs. The efficient and reliable production of circRNA may facilitate its therapeutic use.

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Publication Details

Journal
Nature Biomedical Engineering
Published
2024-12-13
DOI
https://doi.org/10.1038/s41551-024-01306-3
Citations
27
Primary Topic
Circular RNAs in diseases
Type
article
Field-Weighted Citation Impact
6.08

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article

Efficient circular RNA synthesis for potent rolling circle translation

Yifei Du, Philipp K. Zuber, Yuliya Gordiyenko, V. Ramakrishnan et al.
27 citations
Nature Biomedical Engineering
Circular RNAs in diseases
6.08
article

Efficient circular RNA synthesis for potent rolling circle translation

Yifei Du, Philipp K. Zuber, Yuliya Gordiyenko, V. Ramakrishnan, Xueyan Li, H. Xiao
article en
27 citations

Abstract

Circular RNA (circRNA) is a candidate for next-generation messenger RNA therapeutics owing to its remarkable stability. Here we describe trans-splicing-based methods for the synthesis of circRNAs over 8,000 nucleotides. The methods are independent of bacterial sequences, outperform the permuted intron-exon method and allow for the incorporation of RNA modifications. The resulting unmodified circRNAs, which incorporate sequences from human 28S ribosomal RNA, display low immunogenicity and are translated more efficiently than permuted intron-exon-derived circRNAs. Additionally, by using viral internal ribosomal entry sites for rolling circle translation, we show that ribosomes can efficiently read through highly structured internal ribosomal entry sites, enhancing the efficiency of rolling circle translation by over 7,000-fold with respect to previous constructs. The efficient and reliable production of circRNA may facilitate its therapeutic use.

Nature Biomedical EngineeringVol. 9(7)
MRC Laboratory of Molecular Biology (GB)
European Molecular Biology Organization, Wellcome, Wellcome Trust, Leverhulme Trust, China Postdoctoral Science Foundation, Deutsche Akademie der Naturforscher Leopoldina - Nationale Akademie der Wissenschaften, Medical Research Council
Openalex Percentile: Top 3%
Circular RNAs in diseases
6.08
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Efficient circular RNA synthesis for potent rolling circle translation — Yifei Du, Philipp K. Zuber, et al. · Nature Biomedical Engineering (2024) | TGRS Research Map | TGRS