A pooled analysis of host factors that affect nucleotide excision repair in humans

Nucleotide excision repair (NER) is crucial for repairing bulky lesions and crosslinks in DNA caused by exogenous and endogenous genotoxins. The number of studies that have considered DNA repair as a biomarker is limited, and therefore one of the primary objectives of the European COST Action hCOMET (CA15132) was to assemble and analyse a pooled database of studies with data on NER activity. The database comprised 738 individuals, gathered from 5 laboratories that ran population studies using the comet-based in vitro DNA repair assay. NER activity data in peripheral blood mononuclear cells were normalized and correlated with various host-related factors, including sex, age, body mass index (BMI), and smoking habits. This multifaceted analysis uncovered significantly higher NER activity in female participants compared to males (1.08 ± 0.74 vs. 0.92 ± 0.71; P = .002). Higher NER activity was seen in older subjects (>30 years), and the effect of age was most pronounced in the oldest females, particularly those over 70 years (P = .001). Females with a normal BMI (<25 kg/m2) exhibited the highest levels of NER, whereas the lowest NER was observed in overweight males (BMI ≥ 25 kg/m2). No independent effect of smoking was found. After stratification by sex and BMI, higher NER was observed in smoking males (P = .017). The biological implication of higher or lower repair capacity remains unclear; the inclusion of DNA repair as a biomarker in molecular epidemiological trials should elucidate the link between health and disease status.

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Publication Details

Journal
Mutagenesis
Published
2024-12-13
DOI
https://doi.org/10.1093/mutage/geae028
Citations
1
Primary Topic
DNA Repair Mechanisms
Type
article
Field-Weighted Citation Impact
0.23

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A pooled analysis of host factors that affect nucleotide excision repair in humans

Pavel Vodička, Roger Godschalk, Sergey Shaposhnikov, Stefano Bonassi et al.
1 citations
Mutagenesis
DNA Repair Mechanisms
0.23
article

A pooled analysis of host factors that affect nucleotide excision repair in humans

Pavel Vodička, Roger Godschalk, Sergey Shaposhnikov, Stefano Bonassi, Frederik‐Jan van Schooten, Mirta Milić, Sabine A. S. Langie, Gunnar Brunborg, Irene Orlow, Andrew Collins, Jana Slyšková, Amaya Azqueta, Congying Zheng, Maria Dusinka
article en
1 citations

Abstract

Nucleotide excision repair (NER) is crucial for repairing bulky lesions and crosslinks in DNA caused by exogenous and endogenous genotoxins. The number of studies that have considered DNA repair as a biomarker is limited, and therefore one of the primary objectives of the European COST Action hCOMET (CA15132) was to assemble and analyse a pooled database of studies with data on NER activity. The database comprised 738 individuals, gathered from 5 laboratories that ran population studies using the comet-based in vitro DNA repair assay. NER activity data in peripheral blood mononuclear cells were normalized and correlated with various host-related factors, including sex, age, body mass index (BMI), and smoking habits. This multifaceted analysis uncovered significantly higher NER activity in female participants compared to males (1.08 ± 0.74 vs. 0.92 ± 0.71; P = .002). Higher NER activity was seen in older subjects (>30 years), and the effect of age was most pronounced in the oldest females, particularly those over 70 years (P = .001). Females with a normal BMI (<25 kg/m2) exhibited the highest levels of NER, whereas the lowest NER was observed in overweight males (BMI ≥ 25 kg/m2). No independent effect of smoking was found. After stratification by sex and BMI, higher NER was observed in smoking males (P = .017). The biological implication of higher or lower repair capacity remains unclear; the inclusion of DNA repair as a biomarker in molecular epidemiological trials should elucidate the link between health and disease status.

MutagenesisVol. 40(2)
Health Effects Institute (US), Memorial Sloan Kettering Cancer Center (US), Vita-Salute San Raffaele University (IT), Czech Academy of Sciences (CZ), Charles University (CZ), San Raffaele University of Rome (IT), Maastricht University (NL), Cancer Registry of Norway (NO), Czech Academy of Sciences, Institute of Experimental Medicine (CZ), IRCCS Ospedale San Raffaele (IT), Institute for Medical Research and Occupational Health (HR), Istituti di Ricovero e Cura a Carattere Scientifico (IT), Oslo Cancer Cluster (NO), Istituto di Ricovero e Cura a Carattere Scientifico San Raffaele (IT), Atotech (United States) (US), Universidad de Navarra (ES)
European Commission
Good health and well-being
Openalex Percentile: Top 40%
DNA Repair Mechanisms
0.23
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