Simultaneous estimation of multiple soil properties from vis-NIR spectra using a multi-gate mixture-of-experts with data augmentation

• The MMoE model has higher accuracy in evaluating ten soil properties in LUCAS database. • Stacking multiple preprocessed data can maximize the spectral information. • MMoE is more suitable for full-spectrum modeling than feature-spectrum modeling. Simultaneous estimation of multiple soil properties from vis-NIR hyperspectra presents a cost-effective and time-efficient approach. Previous studies have utilized multi-task convolutional neural network (multi-CNN) with share-bottom structures based on the hard parameter sharing. However, multi-CNN often ignores the differential characteristics of correlations between soil properties, limiting the accuracy of soil property estimation. The multi-gate mixture-of-experts network (MMoE) offers a solution by extracting both common features across all soil properties and unique features specific to each soil property, which probably could provide better estimation outcomes than the conventional shared-bottom multi-CNN. In the present study, a MMoE was built based on a total of 17,272 mineral soil samples from the Land Use/Cover Area Frame Survey (LUCAS) topsoil database that includes vis-NIR spectra with ten physicochemical properties, i.e., clay, silt, sand, pH (in water), organic content (OC), calcium carbonate (CaCO 3 ), nitrogen (N), phosphorous (P), potassium (K), and cation exchange capacity (CEC). To evaluate the performance of MMoE, a series of other models were also built, i.e., partial least square regression (PLSR), single-task convolutional neural network (single-CNN), multi-task convolutional neural network (multi-CNN) and multi-task long short-term memory (multi-LSTM). Furthermore, performance of feature-spectrum selected by competitive adaptive reweighted sampling (CARS) on the accuracy of the MMoE was also explored, as well as a data augmentation method of stacking raw spectra with five preprocessed spectra data. The results demonstrated that MMoE had higher accuracy than PLSR, single-CNN, and multi-LSTM models, with RMSE reduction of 5 %–48 %, R 2 improvement of 1 %–119 %, and CCC improvement of 0 %–74 %. Compared with multi-CNN, MMoE showed better accuracy for all properties except pH, with RMSE reduction of 3 %–8 %, R 2 improvement of 1 %–12 %, and CCC improvement of 0 %–5 %. However, the feature-spectrum selected by CARS did not improve the accuracy of MMoE compared to full-band spectrum, whereas the data augmentation method was effective in improving the estimation accuracy of MMoE compared to raw spectra, with RMSE reduction of 14 %–28 %, R 2 improvement of 3 %–88 %, and CCC improvement of 1 %–63 %. Consequently, this study proves that MMoE based on data augmentation is an efficient and accurate method for the simultaneous estimation of multiple soil properties from vis-NIR spectra.

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Publication Details

Journal
Geoderma
Published
2024-12-12
DOI
https://doi.org/10.1016/j.geoderma.2024.117127
Citations
15
Primary Topic
Soil Geostatistics and Mapping
Type
article
Field-Weighted Citation Impact
3.09

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article

Simultaneous estimation of multiple soil properties from vis-NIR spectra using a multi-gate mixture-of-experts with data augmentation

Yanan Zhou, Meiwei Zhang, Xiaolin Sun, Xiaoqing Wang et al.
15 citations
Geoderma
Soil Geostatistics and Mapping
3.09
article

Simultaneous estimation of multiple soil properties from vis-NIR spectra using a multi-gate mixture-of-experts with data augmentation

Yanan Zhou, Meiwei Zhang, Xiaolin Sun, Xiaoqing Wang, Lingli Wang, Ling-Tao Zeng, Yu-Pei Cui
article en
15 citations

Abstract

• The MMoE model has higher accuracy in evaluating ten soil properties in LUCAS database. • Stacking multiple preprocessed data can maximize the spectral information. • MMoE is more suitable for full-spectrum modeling than feature-spectrum modeling. Simultaneous estimation of multiple soil properties from vis-NIR hyperspectra presents a cost-effective and time-efficient approach. Previous studies have utilized multi-task convolutional neural network (multi-CNN) with share-bottom structures based on the hard parameter sharing. However, multi-CNN often ignores the differential characteristics of correlations between soil properties, limiting the accuracy of soil property estimation. The multi-gate mixture-of-experts network (MMoE) offers a solution by extracting both common features across all soil properties and unique features specific to each soil property, which probably could provide better estimation outcomes than the conventional shared-bottom multi-CNN. In the present study, a MMoE was built based on a total of 17,272 mineral soil samples from the Land Use/Cover Area Frame Survey (LUCAS) topsoil database that includes vis-NIR spectra with ten physicochemical properties, i.e., clay, silt, sand, pH (in water), organic content (OC), calcium carbonate (CaCO 3 ), nitrogen (N), phosphorous (P), potassium (K), and cation exchange capacity (CEC). To evaluate the performance of MMoE, a series of other models were also built, i.e., partial least square regression (PLSR), single-task convolutional neural network (single-CNN), multi-task convolutional neural network (multi-CNN) and multi-task long short-term memory (multi-LSTM). Furthermore, performance of feature-spectrum selected by competitive adaptive reweighted sampling (CARS) on the accuracy of the MMoE was also explored, as well as a data augmentation method of stacking raw spectra with five preprocessed spectra data. The results demonstrated that MMoE had higher accuracy than PLSR, single-CNN, and multi-LSTM models, with RMSE reduction of 5 %–48 %, R 2 improvement of 1 %–119 %, and CCC improvement of 0 %–74 %. Compared with multi-CNN, MMoE showed better accuracy for all properties except pH, with RMSE reduction of 3 %–8 %, R 2 improvement of 1 %–12 %, and CCC improvement of 0 %–5 %. However, the feature-spectrum selected by CARS did not improve the accuracy of MMoE compared to full-band spectrum, whereas the data augmentation method was effective in improving the estimation accuracy of MMoE compared to raw spectra, with RMSE reduction of 14 %–28 %, R 2 improvement of 3 %–88 %, and CCC improvement of 1 %–63 %. Consequently, this study proves that MMoE based on data augmentation is an efficient and accurate method for the simultaneous estimation of multiple soil properties from vis-NIR spectra.

GeodermaVol. 453
Guangxi University (CN), Sun Yat-sen University (CN), Chinese Academy of Sciences (CN), Institute of Applied Ecology (CN)
National Natural Science Foundation of China
Zero hunger
Openalex Percentile: Top 8%
Soil Geostatistics and Mapping
3.09
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