Is DL-based Reconstruction for Fiber Orientation Distribution (FOD) Comparable to MSMT-Based FOD for Fiber Bundle Analysis?

The quality of fiber bundles for tractography is linked to dMRI acquisition parameters, with higher quality from costly multi-shell exams. This study examines whether the new FOD-Swin-Net (FSN) angular super-resolution deep learning method matches the quality and technique of multi-shell multi-tissue (MSMT-CSD) reconstruction, while reducing computational demands and acquisition complexity with an initial single-shell acquisition. We also compare FSN to the single-shell derived FOD standard (SS3T-CSD). Fascicle segmentation in deep and superficial white matter was performed using atlases. By calculating bundle masks and density maps we computed similarity metrics including streamline-based bundle adjacency, voxel-based bundle adjacency, voxel-based density correlation, and weighted Dice coefficient. The findings reveal that approximately 82.6% of the evaluated fascicles show a greater similarity between FSN and the MSMT-CSD technique, and of this percentage, 56.7% exhibit a significant difference, indicating potential cost-effective benefits.

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Published
2024-11-13
DOI
https://doi.org/10.1109/sipaim62974.2024.10783621
Primary Topic
Surface Roughness and Optical Measurements
Type
article
Field-Weighted Citation Impact
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article

Is DL-based Reconstruction for Fiber Orientation Distribution (FOD) Comparable to MSMT-Based FOD for Fiber Bundle Analysis?

Letícia Rittner, Pamela Guevara, Diedre Carmo, Mateus Oliveira da Silva et al.
Surface Roughness and Optical Measurements
article

Is DL-based Reconstruction for Fiber Orientation Distribution (FOD) Comparable to MSMT-Based FOD for Fiber Bundle Analysis?

Letícia Rittner, Pamela Guevara, Diedre Carmo, Mateus Oliveira da Silva, Sebastián Navarrete, Natalia Vidal
article en

Abstract

The quality of fiber bundles for tractography is linked to dMRI acquisition parameters, with higher quality from costly multi-shell exams. This study examines whether the new FOD-Swin-Net (FSN) angular super-resolution deep learning method matches the quality and technique of multi-shell multi-tissue (MSMT-CSD) reconstruction, while reducing computational demands and acquisition complexity with an initial single-shell acquisition. We also compare FSN to the single-shell derived FOD standard (SS3T-CSD). Fascicle segmentation in deep and superficial white matter was performed using atlases. By calculating bundle masks and density maps we computed similarity metrics including streamline-based bundle adjacency, voxel-based bundle adjacency, voxel-based density correlation, and weighted Dice coefficient. The findings reveal that approximately 82.6% of the evaluated fascicles show a greater similarity between FSN and the MSMT-CSD technique, and of this percentage, 56.7% exhibit a significant difference, indicating potential cost-effective benefits.

Universidade Estadual de Campinas (UNICAMP) (BR)
Fondo Nacional de Desarrollo Científico y Tecnológico
Openalex Percentile: Top 75%
Surface Roughness and Optical Measurements
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