Antioxidative Potential of 3‐Methoxyluteolin: Density Functional Theory (DFT), Molecular Docking, and Dynamics—A Combined Experimental and Computational Study

The current study first describes the antioxidative potential of 3-methoxyluteolin. The experimental result is supported by computational approaches. The studied flavone (IC<sub>50</sub> 12.40 µg/mL) was comparable to ascorbic acid in antioxidative activity against 2,2-diphenyl-1-picrylhydrazyl (DPPH) radicals (IC<sub>50</sub> 11.38 µg/mL). From DFT (density functional theory) calculations, its principal radical mechanism in gas and lipid was the FHT (formal hydrogen transfer), whereas the SPL-ET (sequential proton loss-electron transfer) was the main way in water. Hydroxyl groups were crucial radical scavenging sites, especially at carbon C-4'. Kinetic evidence indicated that the reactions between the studied compound with HOO˙ radicals resulted in the k<sub>overall</sub> (overall rate constant) of 2.5 × 10<sup>9</sup> and 1.07 × 10<sup>3</sup> (M s)<sup>-1</sup> in water and pentyl ethanoate, respectively. The studied molecule also chelated to Zn metal ion to form Zn(3-methoxyluteolin)<sub>2</sub> complex with the lowest binding energy value of -322.911 kcal/mol. Considering the neurodegenerative inhibitory potentials of the studied compound, molecular docking results revealed that 3-methoxyluteolin interacted with the active sites of both acetylcholinesterase (AChE) and butyrylcholinesterase (BChE) with the binding affinities of -9.493 and -8.812 kcal/mol, respectively, which are stronger than the reference compound tacrine. To assess the structural stability and binding interactions with each studied protein, molecular dynamics simulations were conducted. The results indicated that the 3-methoxyluteolin complexes with AChE and BChE remained stable during a simulation period.

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Publication Details

Journal
Chemistry & Biodiversity
Published
2024-12-11
DOI
https://doi.org/10.1002/cbdv.202402993
Citations
8
Primary Topic
Free Radicals and Antioxidants
Type
article
Field-Weighted Citation Impact
2.00
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article

Antioxidative Potential of 3‐Methoxyluteolin: Density Functional Theory (DFT), Molecular Docking, and Dynamics—A Combined Experimental and Computational Study

Vũ Minh Trang, Nguyen Xuan Ha, Ninh The Son
8 citations
Chemistry & Biodiversity
Free Radicals and Antioxidants
2.00
article

Antioxidative Potential of 3‐Methoxyluteolin: Density Functional Theory (DFT), Molecular Docking, and Dynamics—A Combined Experimental and Computational Study

Vũ Minh Trang, Nguyen Xuan Ha, Ninh The Son
article en
8 citations

Abstract

The current study first describes the antioxidative potential of 3-methoxyluteolin. The experimental result is supported by computational approaches. The studied flavone (IC<sub>50</sub> 12.40 µg/mL) was comparable to ascorbic acid in antioxidative activity against 2,2-diphenyl-1-picrylhydrazyl (DPPH) radicals (IC<sub>50</sub> 11.38 µg/mL). From DFT (density functional theory) calculations, its principal radical mechanism in gas and lipid was the FHT (formal hydrogen transfer), whereas the SPL-ET (sequential proton loss-electron transfer) was the main way in water. Hydroxyl groups were crucial radical scavenging sites, especially at carbon C-4'. Kinetic evidence indicated that the reactions between the studied compound with HOO˙ radicals resulted in the k<sub>overall</sub> (overall rate constant) of 2.5 × 10<sup>9</sup> and 1.07 × 10<sup>3</sup> (M s)<sup>-1</sup> in water and pentyl ethanoate, respectively. The studied molecule also chelated to Zn metal ion to form Zn(3-methoxyluteolin)<sub>2</sub> complex with the lowest binding energy value of -322.911 kcal/mol. Considering the neurodegenerative inhibitory potentials of the studied compound, molecular docking results revealed that 3-methoxyluteolin interacted with the active sites of both acetylcholinesterase (AChE) and butyrylcholinesterase (BChE) with the binding affinities of -9.493 and -8.812 kcal/mol, respectively, which are stronger than the reference compound tacrine. To assess the structural stability and binding interactions with each studied protein, molecular dynamics simulations were conducted. The results indicated that the 3-methoxyluteolin complexes with AChE and BChE remained stable during a simulation period.

Chemistry & BiodiversityVol. 22(5)
Hanoi National University of Education (VN), Vietnam National University, Hanoi (VN), VNU University of Science (VN), Vietnam Academy of Science and Technology (VN)
Clean water and sanitation
Openalex Percentile: Top 14%
Free Radicals and Antioxidants
2.00
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