Protocol for establishing CRISPR-Cas12a for efficient genome editing of Pseudomonas aeruginosa phages

We developed an efficient type V CRISPR-Cas12a system tailored specifically for Pseudomonas aeruginosa phages, showcasing its remarkable cleavage activity and the ability to precisely introduce genetic modifications, including point mutations, deletions, and insertions, into phage genomes. Here, we present a protocol for establishing CRISPR-Cas12a for genome editing of Pseudomonas aeruginosa phages. We describe steps for the construction of pCRISPR-12a plasmid and guide RNA and the utilization of the type V CRISPR-Cas12a system for precise genetic editing of phages. For complete details on the use and execution of this protocol, please refer to Chen et al.<sup>1</sup>.

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Publication Details

Journal
STAR Protocols
Published
2024-12-01
DOI
https://doi.org/10.1016/j.xpro.2024.103488
Primary Topic
CRISPR and Genetic Engineering
Type
article
Field-Weighted Citation Impact
0.00

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article

Protocol for establishing CRISPR-Cas12a for efficient genome editing of Pseudomonas aeruginosa phages

Yibao Chen, Yuqing Liu, Yujia Liu, Yumei Cai et al.
STAR Protocols
CRISPR and Genetic Engineering
article

Protocol for establishing CRISPR-Cas12a for efficient genome editing of Pseudomonas aeruginosa phages

Yibao Chen, Yuqing Liu, Yujia Liu, Yumei Cai, Bingjie Yan
article en

Abstract

We developed an efficient type V CRISPR-Cas12a system tailored specifically for Pseudomonas aeruginosa phages, showcasing its remarkable cleavage activity and the ability to precisely introduce genetic modifications, including point mutations, deletions, and insertions, into phage genomes. Here, we present a protocol for establishing CRISPR-Cas12a for genome editing of Pseudomonas aeruginosa phages. We describe steps for the construction of pCRISPR-12a plasmid and guide RNA and the utilization of the type V CRISPR-Cas12a system for precise genetic editing of phages. For complete details on the use and execution of this protocol, please refer to Chen et al.<sup>1</sup>.

STAR ProtocolsVol. 5(4)
Shandong Academy of Agricultural Sciences (CN), Shandong Agricultural University (CN)
Texas Space Grant Consortium, National Natural Science Foundation of China, Natural Science Foundation of Shandong Province, Shandong Academy of Agricultural Sciences
Zero hunger
Openalex Percentile: Top 80%
CRISPR and Genetic Engineering
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