Enhanced Specificity in Colorimetric LAMP Assay for Sarocladium kiliense Detection Using a Combination of Two Additives

The genus <i>Sarocladium</i> comprises fungal species closely related to <i>Acremonium</i>, with <i>S. kiliense</i> and <i>S. strictum</i> being medically important. These species can cause infections in both immunocompetent and immunocompromised individuals. The current detection methods are limited, prompting the need for rapid and specific diagnostic tools. We developed a colorimetric loop-mediated isothermal amplification (LAMP) assay targeting <i>S. kiliense</i> (SK-LAMP). The initial prototype assay faced challenges with cross-reactivities with closely related species. To address this, we incorporated two additives, pullulan and tetramethylammonium chloride (TMAC), which are known to reduce non-specific signals in amplification assays. Our study found that a combination of 1% (<i>v</i>/<i>v</i>) pullulan and 0.03 M TMAC enhanced the specific detection of <i>S. kiliense</i> in a 45 min reaction, without non-specific false-positive results for other fungal species. This optimised LAMP assay demonstrated high sensitivity and specificity, offering a reliable and rapid method for detecting <i>S. kiliense</i>. The novel approach of combining additives to enhance assay specificity presents a promising strategy for improving LAMP assays targeting closely related fungal species. This advancement can aid in the timely diagnosis and management of infections caused by <i>S. kiliense</i>, contributing to better patient outcomes and infection control.

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Publication Details

Journal
Journal of Fungi
Published
2024-12-11
DOI
https://doi.org/10.3390/jof10120857
Primary Topic
Biosensors and Analytical Detection
Type
article
Field-Weighted Citation Impact
0.00

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article

Enhanced Specificity in Colorimetric LAMP Assay for Sarocladium kiliense Detection Using a Combination of Two Additives

Pak‐Ting Hau, Franklin Wang‐Ngai Chow, Michael Kam, Eddie Chung-Ting Chau et al.
Journal of Fungi
Biosensors and Analytical Detection
article

Enhanced Specificity in Colorimetric LAMP Assay for Sarocladium kiliense Detection Using a Combination of Two Additives

Pak‐Ting Hau, Franklin Wang‐Ngai Chow, Michael Kam, Eddie Chung-Ting Chau, Chi‐Ching Tsang, Emily W. T. Tam, Joshua Fung, Manuel M. Murillo, Ruide Yu, Y. W. Wong, Lily Siew Yong Ng, Wai-Wai Po
article en

Abstract

The genus <i>Sarocladium</i> comprises fungal species closely related to <i>Acremonium</i>, with <i>S. kiliense</i> and <i>S. strictum</i> being medically important. These species can cause infections in both immunocompetent and immunocompromised individuals. The current detection methods are limited, prompting the need for rapid and specific diagnostic tools. We developed a colorimetric loop-mediated isothermal amplification (LAMP) assay targeting <i>S. kiliense</i> (SK-LAMP). The initial prototype assay faced challenges with cross-reactivities with closely related species. To address this, we incorporated two additives, pullulan and tetramethylammonium chloride (TMAC), which are known to reduce non-specific signals in amplification assays. Our study found that a combination of 1% (<i>v</i>/<i>v</i>) pullulan and 0.03 M TMAC enhanced the specific detection of <i>S. kiliense</i> in a 45 min reaction, without non-specific false-positive results for other fungal species. This optimised LAMP assay demonstrated high sensitivity and specificity, offering a reliable and rapid method for detecting <i>S. kiliense</i>. The novel approach of combining additives to enhance assay specificity presents a promising strategy for improving LAMP assays targeting closely related fungal species. This advancement can aid in the timely diagnosis and management of infections caused by <i>S. kiliense</i>, contributing to better patient outcomes and infection control.

Journal of FungiVol. 10(12)
Tung Wah College (HK), Hong Kong Polytechnic University (HK), Nanyang Polytechnic (SG)
Research Grants Council, University Grants Committee, Hong Kong Polytechnic University, Health and Medical Research Fund
Life in Land
Openalex Percentile: Top 79%
Biosensors and Analytical Detection
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