Stabilizing Tensor Voting for 3D Curvature Estimation
Curvature plays an important role in the function of biological membranes, and is therefore a readout of interest in microscopy data. The PyCurv library established itself as a valuable tool for curvature estimation in 3D microscopy images. However, in noisy images, the method exhibits visible instabilities, which are not captured by the standard error measures. In this article, we investigate the source of these instabilities, provide ade- quate measures to detect them, and introduce a novel post-processing step which corrects the errors. We illustrate the robustness of our enhanced method over various noise regimes and demonstrate that with our orientation correcting post-processing step, the PyCurv library becomes a truly stable tool for curvature quantification.
Authors
- Brigitte Forster (ORCID: https://orcid.org/0000-0002-7586-2970)
- Víctor Pérez (ORCID: https://orcid.org/0000-0001-6266-0264)
- Virginie Uhlmann (ORCID: https://orcid.org/0000-0002-2859-9241)
Publication Details
- Journal
- EPiC series in computing
- Published
- 2024-12-11
- DOI
- https://doi.org/10.29007/4nh8
- Primary Topic
- Medical Image Segmentation Techniques
- Type
- article
- Field-Weighted Citation Impact
- 0.00