Drosophila kikkawai ortholog of the D. melanogaster Muller D element ash1
The <i>Drosophila kikkawai</i> feature with Gene ID 108083276 was determined to be an ortholog of <i>Drosophila melanogaster</i> absent, small, or homeotic discs 1 ( <i>ash1</i> ). Two isoforms, ash1-PB and ash1-PC, were constructed on the <i>D. kikkawai</i> Muller D element using the GEP annotation protocol. The second coding exon of <i>D. kikkawai</i> <i>ash1</i> includes an insertion translated into 18 additional amino acids compared to the <i>D. melanogaster</i> protein and is supported by RNA-Seq coverage, the lack of splice junction predictions, and multiple gene predictors. The first intron in both isoforms of <i>D. kikkawaiash1</i> contains a well conserved non-canonical GC splice site.
Authors
- Cindy Arrigo
- Kayla Chambers
- Claude L Rhyne
- James E. J. Bedard
- John Stanga (ORCID: https://orcid.org/0000-0003-3629-9932)
- Larissa LoBello
- Mia Mo
- A. Nichols
- Destiny Sabb
- Kacie Kershaw
- Cameron Welles
- Joshua Kurucz
Institutions
- Mercer University (US)
- University of the Fraser Valley (CA)
- Washington University in St. Louis (US)
- New Jersey City University (US)
Publication Details
- Journal
- PubMed
- Published
- 2024-08-11
- DOI
- https://doi.org/10.17912/micropub.biology.001322
- Primary Topic
- Chemistry and Stereochemistry Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Science Foundation
- National Institutes of Health
- National Institute of General Medical Sciences