Assessment of genetic diversity and population structure of <i>Corema album</i> accessions from the Atlantic coastal dunes of Portugal

Background Corema album, a wild shrub endemic to the Atlantic coastal dunes of Iberian Peninsula, has important ecological and medicinal value. Corema album has been listed as an endangered plant due to threats associated with anthropogenic events. Conservation of the species is therefore critically important. Objective The aim of this study was to assess the genetic diversity and population structure of four well-characterized populations to support pre-breeding programs aimed at enhancing species knowledge for a future berry crop culture, with the ultimate goal of protecting and conserving the threatened species C. album. Methods The set of 128 C. album accessions was genotyped using six EST-SSR primers and one genomic-SSR primer. Results A total of 65 alleles were obtained with a mean of 9.285 alleles per locus. The genetic diversity was found to be high, with mean values of observed heterozygosity ( Ho) and expected heterozygosity ( He) at 0.594 and 0.756, respectively. Moderate genetic differentiation among populations (FST = 0.095) was observed. STRUCTURE analysis and multivariate analyses roughly categorized the accessions into a complex mixed group. The STRUCTURE analysis revealed no correlation between genetic structure and geographical distribution; however, it facilitated the identification of pure accessions within each population. Conclusions The results aid in the understanding the population structure and genetic diversity and are crucial to optimize conservation strategies as well as the utilization of genetic resources of C. album for a deeper genetic study of the species.

Authors

Institutions

Publication Details

Journal
Journal of Berry Research
Published
2024-11-01
DOI
https://doi.org/10.1177/18785093241290056
Primary Topic
Genetic diversity and population structure
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Assessment of genetic diversity and population structure of Corema album accessions from the Atlantic coastal dunes of Portugal

Filomena Nóbrega, Cândida Sofia Trindade, P.B. Oliveira, Joana Bagoin Guimarães et al.
Journal of Berry Research
Genetic diversity and population structure
article

Assessment of genetic diversity and population structure of Corema album accessions from the Atlantic coastal dunes of Portugal

Filomena Nóbrega, Cândida Sofia Trindade, P.B. Oliveira, Joana Bagoin Guimarães, T. Valdiviesso, Ana Rita Varela, María José Silva
article en

Abstract

Background Corema album, a wild shrub endemic to the Atlantic coastal dunes of Iberian Peninsula, has important ecological and medicinal value. Corema album has been listed as an endangered plant due to threats associated with anthropogenic events. Conservation of the species is therefore critically important. Objective The aim of this study was to assess the genetic diversity and population structure of four well-characterized populations to support pre-breeding programs aimed at enhancing species knowledge for a future berry crop culture, with the ultimate goal of protecting and conserving the threatened species C. album. Methods The set of 128 C. album accessions was genotyped using six EST-SSR primers and one genomic-SSR primer. Results A total of 65 alleles were obtained with a mean of 9.285 alleles per locus. The genetic diversity was found to be high, with mean values of observed heterozygosity ( Ho) and expected heterozygosity ( He) at 0.594 and 0.756, respectively. Moderate genetic differentiation among populations (FST = 0.095) was observed. STRUCTURE analysis and multivariate analyses roughly categorized the accessions into a complex mixed group. The STRUCTURE analysis revealed no correlation between genetic structure and geographical distribution; however, it facilitated the identification of pure accessions within each population. Conclusions The results aid in the understanding the population structure and genetic diversity and are crucial to optimize conservation strategies as well as the utilization of genetic resources of C. album for a deeper genetic study of the species.

Journal of Berry ResearchVol. 14(4)
University of Évora (PT), Instituto Nacional de Investigação Agrária e Veterinária (PT)
Openalex Percentile: Top 75%
Genetic diversity and population structure
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.