Interplay between Energy and Entropy Mediates Ambimodal Selectivity of Cycloadditions

One ambimodal transition state can lead to the formation of multiple products. However, it remains fundamentally unknown how the energy and entropy along the post-TS pathways mediate ambimodal selectivity. Here, we investigated the energy and entropy profiles along the post-TS pathways in four [4 + 2]/[6 + 4] cycloadditions. We observe that the pathway leading to the minor product involves a more pronounced entropic trap. These entropic traps, resulting from the conformational change in the dynamic course of ring closure, act as a reservoir of longer-lived dynamic intermediates that roam on the potential energy surface and have a higher likelihood of redistributing to form the other product. The SpnF-catalyzed Diels-Alder reaction produces [4 + 2] and [6 + 4] adducts with nearly equal product distribution and relatively flat energy profiles, in contrast to other cycloadditions. Unexpectedly, the entropy profiles for these two adducts are distinctly different. The formation of the [6 + 4] adduct encounters an entropic barrier acting as a dynamical bottleneck, while the [4 + 2] adduct involves a substantial entropic trap to maintain long-lived intermediates. These opposing effects hinder both product formations and likely cancel each other out so that an equal product distribution is observed.

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Publication Details

Journal
Journal of Chemical Theory and Computation
Published
2024-12-06
DOI
https://doi.org/10.1021/acs.jctc.4c01138
Citations
5
Primary Topic
Organic Chemistry Cycloaddition Reactions
Type
article
Field-Weighted Citation Impact
1.25

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article

Interplay between Energy and Entropy Mediates Ambimodal Selectivity of Cycloadditions

Yaning Hou, Wook Shin, Zhongyue John Yang, Xin Wang
5 citations
Journal of Chemical Theory and Computation
Organic Chemistry Cycloaddition Reactions
1.25
article

Interplay between Energy and Entropy Mediates Ambimodal Selectivity of Cycloadditions

Yaning Hou, Wook Shin, Zhongyue John Yang, Xin Wang
article en
5 citations

Abstract

One ambimodal transition state can lead to the formation of multiple products. However, it remains fundamentally unknown how the energy and entropy along the post-TS pathways mediate ambimodal selectivity. Here, we investigated the energy and entropy profiles along the post-TS pathways in four [4 + 2]/[6 + 4] cycloadditions. We observe that the pathway leading to the minor product involves a more pronounced entropic trap. These entropic traps, resulting from the conformational change in the dynamic course of ring closure, act as a reservoir of longer-lived dynamic intermediates that roam on the potential energy surface and have a higher likelihood of redistributing to form the other product. The SpnF-catalyzed Diels-Alder reaction produces [4 + 2] and [6 + 4] adducts with nearly equal product distribution and relatively flat energy profiles, in contrast to other cycloadditions. Unexpectedly, the entropy profiles for these two adducts are distinctly different. The formation of the [6 + 4] adduct encounters an entropic barrier acting as a dynamical bottleneck, while the [4 + 2] adduct involves a substantial entropic trap to maintain long-lived intermediates. These opposing effects hinder both product formations and likely cancel each other out so that an equal product distribution is observed.

Journal of Chemical Theory and ComputationVol. 20(24)
Henan University (CN), Vanderbilt University (US)
Vanderbilt University, National Natural Science Foundation of China, Office of Advanced Cyberinfrastructure
Affordable and clean energy
Openalex Percentile: Top 22%
Organic Chemistry Cycloaddition Reactions
1.25
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