The impact of neglecting feature scaling in k-means clustering

Despite the popularity of k-means clustering, feature scaling before applying it can be an essential yet often neglected step. In this study, feature scaling via five methods: Z-score, Min-Max normalization, Percentile transformation, Maximum absolute scaling, or RobustScaler beforehand was compared with using the raw (i.e., non-scaled) data to analyze datasets having features with different or the same units via k-means clustering. The results of an experimental study show that, for features with different units, scaling them before k-means clustering provided better accuracy, precision, recall, and F-score values than when using the raw data. Meanwhile, when features in the dataset had the same unit, scaling them beforehand provided similar results to using the raw data. Thus, scaling the features beforehand is a very important step for datasets with different units, which improves the clustering results and accuracy. Of the five feature-scaling methods used in the dataset with different units, Z-score standardization and Percentile transformation provided similar performances that were superior to the other or using the raw data. While Maximum absolute scaling, slightly more performances than the other scaling methods and raw data when the dataset contains features with the same unit, the improvement was not significant.

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Publication Details

Journal
PLoS ONE
Published
2024-12-06
DOI
https://doi.org/10.1371/journal.pone.0310839
Citations
34
Primary Topic
Advanced Clustering Algorithms Research
Type
article
Field-Weighted Citation Impact
11.81

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article

The impact of neglecting feature scaling in k-means clustering

Chantha Wongoutong
34 citations
PLoS ONE
Advanced Clustering Algorithms Research
11.81
article

The impact of neglecting feature scaling in k-means clustering

Chantha Wongoutong
article en
34 citations

Abstract

Despite the popularity of k-means clustering, feature scaling before applying it can be an essential yet often neglected step. In this study, feature scaling via five methods: Z-score, Min-Max normalization, Percentile transformation, Maximum absolute scaling, or RobustScaler beforehand was compared with using the raw (i.e., non-scaled) data to analyze datasets having features with different or the same units via k-means clustering. The results of an experimental study show that, for features with different units, scaling them before k-means clustering provided better accuracy, precision, recall, and F-score values than when using the raw data. Meanwhile, when features in the dataset had the same unit, scaling them beforehand provided similar results to using the raw data. Thus, scaling the features beforehand is a very important step for datasets with different units, which improves the clustering results and accuracy. Of the five feature-scaling methods used in the dataset with different units, Z-score standardization and Percentile transformation provided similar performances that were superior to the other or using the raw data. While Maximum absolute scaling, slightly more performances than the other scaling methods and raw data when the dataset contains features with the same unit, the improvement was not significant.

PLoS ONEVol. 19(12)
Kasetsart University (TH)
Kasetsart University
Openalex Percentile: Top 1%
Advanced Clustering Algorithms Research
11.81
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