Evolution of a Graph Model for the OMOP Common Data Model

We developed a method for converting OMOP CDM databases into graph databases. Our experiments revealed that the final model outperformed the initial relational-to-graph transformation in both code simplicity and query efficiency, particularly for complex queries.

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Publication Details

Journal
Applied Clinical Informatics
Published
2024-10-01
DOI
https://doi.org/10.1055/s-0044-1791487
Citations
1
Primary Topic
Genomics and Rare Diseases
Type
article
Field-Weighted Citation Impact
0.55

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article

Evolution of a Graph Model for the OMOP Common Data Model

Justin Starren, Luke V. Rasmussen, Mengjia Kang, Jose A. Alvarado-Guzman
1 citations
Applied Clinical Informatics
Genomics and Rare Diseases
0.55
article

Evolution of a Graph Model for the OMOP Common Data Model

Justin Starren, Luke V. Rasmussen, Mengjia Kang, Jose A. Alvarado-Guzman
article en
1 citations

Abstract

We developed a method for converting OMOP CDM databases into graph databases. Our experiments revealed that the final model outperformed the initial relational-to-graph transformation in both code simplicity and query efficiency, particularly for complex queries.

Applied Clinical InformaticsVol. 15(05)
Northwestern University (US), University of Arizona (US)
National Institutes of Health, Feinberg School of Medicine
Partnerships for the goals
Openalex Percentile: Top 24%
Genomics and Rare Diseases
0.55
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