TPR is required for cytoplasmic chromatin fragment formation during senescence

During oncogene-induced senescence there are striking changes in the organisation of heterochromatin in the nucleus. This is accompanied by activation of a pro-inflammatory gene expression programme - the senescence-associated secretory phenotype (SASP) - driven by transcription factors such as NF-κB. The relationship between heterochromatin re-organisation and the SASP has been unclear. Here, we show that TPR, a protein of the nuclear pore complex basket required for heterochromatin re-organisation during senescence, is also required for the very early activation of NF-κB signalling during the stress-response phase of oncogene-induced senescence. This is prior to activation of the SASP and occurs without affecting NF-κB nuclear import. We show that TPR is required for the activation of innate immune signalling at these early stages of senescence and we link this to the formation of heterochromatin-enriched cytoplasmic chromatin fragments thought to bleb off from the nuclear periphery. We show that HMGA1 is also required for cytoplasmic chromatin fragment formation. Together these data suggest that re-organisation of heterochromatin is involved in altered structural integrity of the nuclear periphery during senescence, and that this can lead to activation of cytoplasmic nucleic acid sensing, NF-κB signalling, and activation of the SASP.

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Publication Details

Journal
eLife
Published
2024-12-03
DOI
https://doi.org/10.7554/elife.101702
Citations
4
Primary Topic
Genomics and Chromatin Dynamics
Type
article
Field-Weighted Citation Impact
0.94

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article

TPR is required for cytoplasmic chromatin fragment formation during senescence

Andrea Quintanilla, Bethany M Bartlett, Shelagh Boyle, Yatendra Kumar et al.
4 citations
eLife
Genomics and Chromatin Dynamics
0.94
article

TPR is required for cytoplasmic chromatin fragment formation during senescence

Andrea Quintanilla, Bethany M Bartlett, Shelagh Boyle, Yatendra Kumar, Tamoghna Chowdhury, Wendy A. Bickmore, Charlène Boumendil, Juan Carlos Acosta
article en
4 citations

Abstract

During oncogene-induced senescence there are striking changes in the organisation of heterochromatin in the nucleus. This is accompanied by activation of a pro-inflammatory gene expression programme - the senescence-associated secretory phenotype (SASP) - driven by transcription factors such as NF-κB. The relationship between heterochromatin re-organisation and the SASP has been unclear. Here, we show that TPR, a protein of the nuclear pore complex basket required for heterochromatin re-organisation during senescence, is also required for the very early activation of NF-κB signalling during the stress-response phase of oncogene-induced senescence. This is prior to activation of the SASP and occurs without affecting NF-κB nuclear import. We show that TPR is required for the activation of innate immune signalling at these early stages of senescence and we link this to the formation of heterochromatin-enriched cytoplasmic chromatin fragments thought to bleb off from the nuclear periphery. We show that HMGA1 is also required for cytoplasmic chromatin fragment formation. Together these data suggest that re-organisation of heterochromatin is involved in altered structural integrity of the nuclear periphery during senescence, and that this can lead to activation of cytoplasmic nucleic acid sensing, NF-κB signalling, and activation of the SASP.

eLifeVol. 13
Centre National de la Recherche Scientifique (FR), Universidad de Cantabria (ES), Université de Montpellier (FR), Edinburgh College (GB), Instituto de Biomedicina y Biotecnología de Cantabria (ES), MRC Centre for Regenerative Medicine (GB), Regenerative Medicine Institute (MX), Institute of Genetics and Cancer (GB), University of Edinburgh (GB)
Wellcome Trust, Cancer Research UK, Agence Nationale de la Recherche, Centre National de la Recherche Scientifique, Ministerio de Ciencia e Innovación, Laboratoire d'Excellence EpiGenMed, Medical Research Council, Consejo Superior de Investigaciones Científicas, Agencia Estatal de Investigación
Openalex Percentile: Top 24%
Genomics and Chromatin Dynamics
0.94
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