Panacus: fast and exact pangenome growth and core size estimation
Panacus is implemented in Rust and is published as Open Source software under the MIT license. The source code and documentation are available at https://github.com/marschall-lab/panacus. Panacus can be installed via Bioconda at https://bioconda.github.io/recipes/panacus/README.html.
Authors
- Erik Garrison (ORCID: https://orcid.org/0000-0003-3821-631X)
- Jens Stoye (ORCID: https://orcid.org/0000-0002-4656-7155)
- Daniel Doerr (ORCID: https://orcid.org/0000-0002-3720-6227)
- Luca Parmigiani (ORCID: https://orcid.org/0000-0002-2139-3259)
- Tobias Marschall (ORCID: https://orcid.org/0000-0002-9376-1030)
Institutions
- University of Tennessee Health Science Center (US)
- Bielefeld University (DE)
- Düsseldorf University Hospital (DE)
- Deutsches Diabetes-Zentrum e.V. (DE)
- Heinrich Heine University Düsseldorf (DE)
Publication Details
- Journal
- Bioinformatics
- Published
- 2024-11-27
- DOI
- https://doi.org/10.1093/bioinformatics/btae720
- Citations
- 23
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 5.38
Funders
- European Commission
- National Institutes of Health