Deep learning model meets community-based surveillance of acute flaccid paralysis
Acute flaccid paralysis (AFP) case surveillance is pivotal for the early detection of potential poliovirus, particularly in endemic countries such as Ethiopia. The community-based surveillance system implemented in Ethiopia has significantly improved AFP surveillance. However, challenges like delayed detection and disorganized communication persist. This work proposes a simple deep learning model for AFP surveillance, leveraging transfer learning on images collected from Ethiopia's community key informants through mobile phones. The transfer learning approach is implemented using a vision transformer model pretrained on the ImageNet dataset. The proposed model outperformed convolutional neural network-based deep learning models and vision transformer models trained from scratch, achieving superior accuracy, F1-score, precision, recall, and area under the receiver operating characteristic curve (AUC). It emerged as the optimal model, demonstrating the highest average AUC of 0.870 ± 0.01. Statistical analysis confirmed the significant superiority of the proposed model over alternative approaches (<i>P</i> < 0.001). By bridging community reporting with health system response, this study offers a scalable solution for enhancing AFP surveillance in low-resource settings. The study is limited in terms of the quality of image data collected, necessitating future work on improving data quality. The establishment of a dedicated platform that facilitates data storage, analysis, and future learning can strengthen data quality. Nonetheless, this work represents a significant step toward leveraging artificial intelligence for community-based AFP surveillance from images, with substantial implications for addressing global health challenges and disease eradication strategies.
Authors
- Dessalew Yohannes
- Kokeb Dese (ORCID: https://orcid.org/0000-0003-3591-9570)
- Gelan Ayana (ORCID: https://orcid.org/0000-0002-5219-6098)
- Se‐woon Choe (ORCID: https://orcid.org/0000-0002-7298-4147)
- Jude Dzevela Kong (ORCID: https://orcid.org/0000-0002-7557-5672)
- Hundessa Daba Nemomssa (ORCID: https://orcid.org/0000-0002-1020-845X)
- Legesse Kidanne
- Netsanet Workneh Gidi (ORCID: https://orcid.org/0000-0002-7213-8178)
- Bontu Habtamu
- Gashaw Demlew
- Efrem Wakjira
- Hamdia Murad
- Filimona Bisrat
- Tenager Tadesse
- Ketema Lemma Abdi
- Elbetel Taye
Institutions
- Kumoh National Institute of Technology (KR)
- Jimma University (ET)
- Ethiopian Public Health Institute (ET)
- Addis Ababa Science and Technology University (ET)
- Response Biomedical (Canada) (CA)
- Artificial Intelligence in Medicine (Canada) (CA)
Publication Details
- Journal
- Infectious Disease Modelling
- Published
- 2024-12-03
- DOI
- https://doi.org/10.1016/j.idm.2024.12.002
- Citations
- 2
- Primary Topic
- Viral Infections and Immunology Research
- Type
- article
- Field-Weighted Citation Impact
- 0.80
Funders
- International Development Research Centre
- Foreign, Commonwealth and Development Office
- Natural Sciences and Engineering Research Council of Canada