Noncovalent Bonding in d and f‐Type Coordination Compounds and Lattices. A Case Study

Using as example the [Fe(bpca)(μ-bpca)Gd(NO<sub>3</sub>)<sub>4</sub>]×4CH<sub>3</sub>NO<sub>2</sub>×CH<sub>3</sub>OH system, where Hbpca=bis(2-pyridilcarbonyl)amine), we perform the analysis of bonding components inside the d and f coordination units and between molecular entities from crystal. Aside the nominal long-range interactions between molecular components of the crystal, we considered that the bonding inside the coordination units is also not a covalent regime. We performed Density Functional Theory (DFT) calculations, with plane-waves (PW), in band-structure mode, and with atom-centred bases, by molecular procedures. Observing that the PW-DFT frame is free of basis set superposition errors, which is an important methodological hint underlined here, we estimated various non-covalent terms. E.g. the interaction between inversion-related FeGd units amounts -394.47 kcal/mol, only about -37 kcal/mol being due to Coulomb effects, the remainder being assignable to dispersion forces. One FeGd binuclear interacts with the closest methanol molecule by -9.30 kcal/mol and by -36.57 kcal/mol with the set of four nitromethane molecules. The energy decomposition analysis of molecular calculations showed, aside the expected ionic character (about 82 % of the total cohesion energy of lanthanide ion in molecule), the important role of empty 5d orbitals. The d virtuals are contributing with 68.4 kcal/mol, out of 97.15 kcal/mol quantity estimated as ligand-to-metal donor-acceptor effects.

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Journal
ChemPlusChem
Published
2024-12-01
DOI
https://doi.org/10.1002/cplu.202400632
Primary Topic
Crystal structures of chemical compounds
Type
article
Field-Weighted Citation Impact
0.00

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article

Noncovalent Bonding in d and f‐Type Coordination Compounds and Lattices. A Case Study

Ana Maria Toader, Maria Cristina Buta, Marilena Ferbinţeanu, Fanica Cimpoesu
ChemPlusChem
Crystal structures of chemical compounds
article

Noncovalent Bonding in d and f‐Type Coordination Compounds and Lattices. A Case Study

Ana Maria Toader, Maria Cristina Buta, Marilena Ferbinţeanu, Fanica Cimpoesu
article en

Abstract

Using as example the [Fe(bpca)(μ-bpca)Gd(NO<sub>3</sub>)<sub>4</sub>]×4CH<sub>3</sub>NO<sub>2</sub>×CH<sub>3</sub>OH system, where Hbpca=bis(2-pyridilcarbonyl)amine), we perform the analysis of bonding components inside the d and f coordination units and between molecular entities from crystal. Aside the nominal long-range interactions between molecular components of the crystal, we considered that the bonding inside the coordination units is also not a covalent regime. We performed Density Functional Theory (DFT) calculations, with plane-waves (PW), in band-structure mode, and with atom-centred bases, by molecular procedures. Observing that the PW-DFT frame is free of basis set superposition errors, which is an important methodological hint underlined here, we estimated various non-covalent terms. E.g. the interaction between inversion-related FeGd units amounts -394.47 kcal/mol, only about -37 kcal/mol being due to Coulomb effects, the remainder being assignable to dispersion forces. One FeGd binuclear interacts with the closest methanol molecule by -9.30 kcal/mol and by -36.57 kcal/mol with the set of four nitromethane molecules. The energy decomposition analysis of molecular calculations showed, aside the expected ionic character (about 82 % of the total cohesion energy of lanthanide ion in molecule), the important role of empty 5d orbitals. The d virtuals are contributing with 68.4 kcal/mol, out of 97.15 kcal/mol quantity estimated as ligand-to-metal donor-acceptor effects.

ChemPlusChemVol. 90(3)
University of Bucharest (RO), Academia Oamenilor de Știință din România (RO), National Institute of Research and Development for Biological Sciences (RO), Romanian Academy (RO)
Ministerul Cercetării, Inovării şi Digitalizării, Unitatea Executiva pentru Finantarea Invatamantului Superior, a Cercetarii, Dezvoltarii si Inovarii
Affordable and clean energy
Openalex Percentile: Top 83%
Crystal structures of chemical compounds
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